RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 IGKV3D-7A0A0C4DH55 119 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 IGKV3OR2-268A0A0C4DH90 116 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 IGKV2-29A2NJV5 120 aaPredicted RBP1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 HYPMO75409 117 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 ZNF93P35789 620 aaPredicted RBP1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 C1orf137Q5JT78 98 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 PATE2Q6UY27 113 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 TMEM254Q8TBM7 123 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 RETNLBQ9BQ08 111 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 DDA1Q9BW61 102 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 CACYBPQ9HB71 228 aaKnown RBP1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 RNF11Q9Y3C5 154 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 NUBP2Q9Y5Y2 271 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 SNURFQ9Y675 71 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 ALPK2Q86TB3 2170 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 PBRM1Q86U86 1689 aa1.35□□□□□ -2.19
PRPF40A-205ENST00000467114 TRBV6-8A0A0A6YYG3 113 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 TRAV5A0A0B4J249 113 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 GNG14A0A1W2PPG7 69 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 TCRBV4S1A1TA0A5B7 111 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 H3BQV1 296 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 K7ERJ3 54 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 CST7O76096 145 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 IFNA4P05014 189 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 OR10J4P0C629 311 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 ROMO1P60602 79 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 CNBPP62633 177 aaKnown RBP1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 OR5D16Q8NGK9 328 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 GRPEL2Q8TAA5 225 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 C4orf3Q8WVX3 66 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 CHCHD1Q96BP2 118 aaKnown RBP1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 ISOC1Q96CN7 298 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 BORCS8Q96FH0 119 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 KLK9Q9UKQ9 250 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 SOX21Q9Y651 276 aaPredicted RBP1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 CEP164Q9UPV0 1460 aa1.34□□□□□ -2.19
PRPF40A-205ENST00000467114 COL4A1P02462 1669 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 INTS1Q8N201 2190 aaKnown RBP1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 IGKV2-40A0A087WW87 121 aaPredicted RBP1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 CCDC160A6NGH7 325 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 E7EQ34 232 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 C17orf112F2Z3M2 114 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 RER1O15258 196 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 HIST1H2BKO60814 126 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 IGKV2D-40P01614 121 aaPredicted RBP1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 HIST1H2BJP06899 126 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 HBBP68871 147 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 TEX261Q6UWH6 196 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 PHF5AQ7RTV0 110 aaKnown RBP1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 OR5D14Q8NGL3 314 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 RMND5BQ96G75 393 aaPredicted RBP1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 EFCAB11Q9BUY7 163 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 OTORQ9NRC9 128 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 RASL12Q9NYN1 266 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 NAT8BQ9UHF3 227 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 LAMTOR2Q9Y2Q5 125 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 ASB4Q9Y574 426 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 U3KQ87 197 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 MYH10P35580 1976 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 EML6Q6ZMW3 1958 aa1.33□□□□□ -2.2
PRPF40A-205ENST00000467114 ARFGEF3Q5TH69 2177 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 COL4A5P29400 1685 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 IGKV3-7A0A075B6H7 116 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 B4DSR2 109 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 M0R233 179 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 HCRTO43612 131 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 S100GP29377 79 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 RAB5CP51148 216 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 CDK6Q00534 326 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 KLRD1Q13241 179 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 TMEM128Q5BJH2 165 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 C4orf22Q6V702 233 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 TAC4Q86UU9 113 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 PRR15Q8IV56 129 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 ST6GALNAC3Q8NDV1 305 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 POP5Q969H6 163 aaKnown RBP1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 ZC2HC1AQ96GY0 325 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 OR2H1Q9GZK4 316 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 NDUFAF1Q9Y375 327 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 CHCHD2Q9Y6H1 151 aaPredicted RBP1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 CD109Q6YHK3 1445 aa1.32□□□□□ -2.2
PRPF40A-205ENST00000467114 UBR2Q8IWV8 1755 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 CAMSAP2Q08AD1 1489 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 A0A087WX48 190 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 IGKV2D-26A0A0A0MRZ7 120 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 TRDV1A0A1B0GX56 115 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 ZNF736B4DX44 427 aaPredicted RBP1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 E7EUB6 86 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 BCL2P10415 239 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 S100A11P31949 105 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 RPL35P42766 123 aaKnown RBP1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 DSCR4P56555 118 aaPredicted RBP1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 C1orf134Q5TEV5 83 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 C2orf82Q6UX34 121 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 AKAP14Q86UN6 197 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 RAB37Q96AX2 223 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 TP53RKQ96S44 253 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 TECPR2O15040 1411 aa1.31□□□□□ -2.2
PRPF40A-205ENST00000467114 DIDO1Q9BTC0 2240 aaKnown RBP1.3□□□□□ -2.2
PRPF40A-205ENST00000467114 TRAV10A0A0B4J240 114 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms