RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.12■□□□□ 0.17
USP42-205ENST00000465073 TRIM63Q969Q1 353 aa16.12■□□□□ 0.17
USP42-205ENST00000465073 SFT2D2O95562 160 aa16.11■□□□□ 0.17
USP42-205ENST00000465073 SPANXN5Q5MJ07 72 aa16.11■□□□□ 0.17
USP42-205ENST00000465073 H3BMQ9 156 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 GATA2P23769 480 aaPredicted RBP16.1■□□□□ 0.17
USP42-205ENST00000465073 CNN1P51911 297 aaKnown RBP16.1■□□□□ 0.17
USP42-205ENST00000465073 FAM3BP58499 235 aaPredicted RBP16.1■□□□□ 0.17
USP42-205ENST00000465073 B2MP61769 119 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 AKR1C1Q04828 323 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 PYDC2Q56P42 97 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 TMEM182Q6ZP80 229 aaPredicted RBP16.1■□□□□ 0.17
USP42-205ENST00000465073 C15orf53Q8NAA6 179 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 DEDD2Q8WXF8 326 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 INSP01308 110 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 PPP1R1AQ13522 171 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 C1orf134Q5TEV5 83 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 OR11H7Q8NGC8 314 aa16.1■□□□□ 0.17
USP42-205ENST00000465073 STRAPQ9Y3F4 350 aaKnown RBP16.1■□□□□ 0.17
USP42-205ENST00000465073 LYRM9A8MSI8 78 aa16.09■□□□□ 0.17
USP42-205ENST00000465073 HOXB5P09067 269 aa16.09■□□□□ 0.17
USP42-205ENST00000465073 SPINK13Q1W4C9 94 aa16.09■□□□□ 0.17
USP42-205ENST00000465073 TMEM144Q7Z5S9 345 aa16.09■□□□□ 0.17
USP42-205ENST00000465073 TRAV8-2A0A0B4J237 113 aa16.08■□□□□ 0.16
USP42-205ENST00000465073 ZNF705GA8MUZ8 300 aaPredicted RBP16.08■□□□□ 0.16
USP42-205ENST00000465073 M0R2Z0 102 aa16.08■□□□□ 0.16
USP42-205ENST00000465073 CRXO43186 299 aaPredicted RBP16.08■□□□□ 0.16
USP42-205ENST00000465073 IGFL4Q6B9Z1 124 aa16.08■□□□□ 0.16
USP42-205ENST00000465073 TSPOP30536 169 aa16.07■□□□□ 0.16
USP42-205ENST00000465073 ACOT7LQ6ZUV0 252 aa16.07■□□□□ 0.16
USP42-205ENST00000465073 SHANK2-AS3Q9BTD1 123 aa16.07■□□□□ 0.16
USP42-205ENST00000465073 SLC25A39Q9BZJ4 359 aaPredicted RBP16.07■□□□□ 0.16
USP42-205ENST00000465073 H3BP45 60 aa16.06■□□□□ 0.16
USP42-205ENST00000465073 H3BRN7 92 aa16.06■□□□□ 0.16
USP42-205ENST00000465073 RPL7P18124 248 aaKnown RBP16.06■□□□□ 0.16
USP42-205ENST00000465073 FGL1Q08830 312 aa16.06■□□□□ 0.16
USP42-205ENST00000465073 RNF182Q8N6D2 247 aa16.06■□□□□ 0.16
USP42-205ENST00000465073 PRM2P04554 102 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 IL5P05113 134 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 RAP2BP61225 183 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 ID3Q02535 119 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 CYP2G1PQ6ZSU1 146 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 ZNF738Q8NE65 137 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 HIGD1AQ9Y241 93 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 V9GYH0 126 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 RYR1P21817 5038 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 PKD1P98161 4303 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 DNAH11Q96DT5 4516 aa16.05■□□□□ 0.16
USP42-205ENST00000465073 HYPMO75409 117 aa16.04■□□□□ 0.16
USP42-205ENST00000465073 DEFB130BP0DP73 79 aa16.04■□□□□ 0.16
USP42-205ENST00000465073 DEFB130AP0DP74 79 aa16.04■□□□□ 0.16
USP42-205ENST00000465073 UBE2MP61081 183 aaKnown RBP16.04■□□□□ 0.16
USP42-205ENST00000465073 ATG101Q9BSB4 218 aa16.04■□□□□ 0.16
USP42-205ENST00000465073 MUC4Q99102 2169 aa16.04■□□□□ 0.16
USP42-205ENST00000465073 DYNC1H1Q14204 4646 aaKnown RBP16.04■□□□□ 0.16
USP42-205ENST00000465073 SMCO3A2RU48 225 aa16.03■□□□□ 0.16
USP42-205ENST00000465073 BOLA2-SMG1P6H3BVE0 249 aa16.03■□□□□ 0.16
USP42-205ENST00000465073 PLP1P60201 277 aa16.03■□□□□ 0.16
USP42-205ENST00000465073 S100A7AQ86SG5 101 aa16.03■□□□□ 0.16
USP42-205ENST00000465073 BAP18Q8IXM2 172 aa16.03■□□□□ 0.16
USP42-205ENST00000465073 SELENOTP62341 195 aa16.03■□□□□ 0.16
USP42-205ENST00000465073 PSENENQ9NZ42 101 aa16.03■□□□□ 0.16
USP42-205ENST00000465073 NACAE9PAV3 2078 aa16.02■□□□□ 0.16
USP42-205ENST00000465073 POLR2GP62487 172 aaKnown RBP eCLIP16.02■□□□□ 0.15
USP42-205ENST00000465073 TMEM256Q8N2U0 113 aa16.02■□□□□ 0.15
USP42-205ENST00000465073 OR8A1Q8NGG7 326 aa16.02■□□□□ 0.15
USP42-205ENST00000465073 TRAV12-2A0A075B6T6 113 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 A0A087X0K7 114 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 PLAC8L1A1L4L8 177 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 OR5G3P0C626 314 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 LINC00869P0C866 280 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 CXCL3P19876 107 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 AZU1P20160 251 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 S100A5P33763 92 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 RHOBP62745 196 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 HIST1H1AQ02539 215 aaPredicted RBP16.01■□□□□ 0.15
USP42-205ENST00000465073 ZNF575Q86XF7 245 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 LINC01587Q99440 93 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 PPP1R14DQ9NXH3 145 aa16.01■□□□□ 0.15
USP42-205ENST00000465073 C9orf170A2RU37 121 aa16■□□□□ 0.15
USP42-205ENST00000465073 F5H768 121 aa16■□□□□ 0.15
USP42-205ENST00000465073 ADAP1O75689 374 aa16■□□□□ 0.15
USP42-205ENST00000465073 SMIM8Q96KF7 97 aa16■□□□□ 0.15
USP42-205ENST00000465073 RNF24Q9Y225 148 aa16■□□□□ 0.15
USP42-205ENST00000465073 CBY3A6NI87 242 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 PMS2P5A8MQ11 134 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 ATP5G1P05496 136 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 ATP5G3P48201 142 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 TAS2R60P59551 318 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 FCN2Q15485 313 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 PSG3Q16557 428 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 LRRC20Q8TCA0 184 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 UHRF2Q96PU4 802 aa15.99■□□□□ 0.15
USP42-205ENST00000465073 FNDC10F2Z333 226 aa15.98■□□□□ 0.15
USP42-205ENST00000465073 DLK1P80370 383 aa15.98■□□□□ 0.15
USP42-205ENST00000465073 CCDC190Q86UF4 302 aa15.98■□□□□ 0.15
USP42-205ENST00000465073 NPVFQ9HCQ7 196 aa15.98■□□□□ 0.15
USP42-205ENST00000465073 K7EPK0 472 aa15.97■□□□□ 0.15
USP42-205ENST00000465073 SSSCA1O60232 199 aa15.97■□□□□ 0.15
USP42-205ENST00000465073 NUDT3O95989 172 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms