RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 SRSF2Q01130 221 aaKnown RBP6.14□□□□□ -1.43
USP4-207ENST00000462673 PRSS8Q16651 343 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 DMRTA1Q5VZB9 504 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 LEMD1Q68G75 181 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 H2BFWTQ7Z2G1 175 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 MMD2Q8IY49 270 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 DDB2Q92466 427 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 MDFIQ99750 246 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 TXN2Q99757 166 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 QTRT1Q9BXR0 403 aaKnown RBP6.14□□□□□ -1.43
USP4-207ENST00000462673 GNB1LQ9BYB4 327 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 ZNF702PQ9H963 129 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 FBXL7Q9UJT9 491 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 ZNF580Q9UK33 172 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 TP53TG3Q9ULZ0 132 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 SIGLEC9Q9Y336 463 aa6.14□□□□□ -1.43
USP4-207ENST00000462673 PSMB11A5LHX3 300 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 LINC00473A8K010 186 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 M0QZ24 198 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 FCN1O00602 326 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 SLC25A17O43808 307 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 ZNF253O75346 499 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 RBMXL2O75526 392 aaKnown RBP6.13□□□□□ -1.43
USP4-207ENST00000462673 S1PR2O95136 353 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 TOMM40O96008 361 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 HLA-DQA1P01909 254 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 AMY1AP04745 511 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 REG1AP05451 166 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 OR5G3P0C626 314 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 NPPCP23582 126 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 G6PCP35575 357 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 CTRLP40313 264 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 AMTP48728 403 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 PROK1P58294 105 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 KRTDAPP60985 99 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 RHOBP62745 196 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 RELBQ01201 579 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 FXYD3Q14802 87 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 SAPCD1Q5SSQ6 148 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 C19orf35Q6ZS72 473 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 OR2D3Q8NGH3 330 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 OR5B3Q8NH48 314 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 WFDC12Q8WWY7 111 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 DERL1Q9BUN8 251 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 FBXL15Q9H469 300 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 NF1P21359 2839 aa6.13□□□□□ -1.43
USP4-207ENST00000462673 ANK3Q12955 4377 aaKnown RBP6.12□□□□□ -1.43
USP4-207ENST00000462673 C15orf62A8K5M9 175 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 NUPR1O60356 82 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 ELANEP08246 267 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 OR10J4P0C629 311 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 AREGP15514 252 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 GCHFRP30047 84 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 RPL30P62888 115 aaKnown RBP6.12□□□□□ -1.43
USP4-207ENST00000462673 CX3CL1P78423 397 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 EIF4EBP1Q13541 118 aaPredicted RBP6.12□□□□□ -1.43
USP4-207ENST00000462673 PMCHL1Q16048 86 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 C2CD3Q4AC94 2353 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 PDLIM3Q53GG5 364 aaPredicted RBP6.12□□□□□ -1.43
USP4-207ENST00000462673 Q6ZN92 141 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 ZNF114Q8NC26 417 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 OR4A16Q8NH70 328 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 RITA1Q96K30 269 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 GGTLC1Q9BX51 225 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 COMMD5Q9GZQ3 224 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 WNT10AQ9GZT5 417 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 SERTAD4Q9NUC0 356 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 BET1LQ9NYM9 111 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 LAMTOR2Q9Y2Q5 125 aa6.12□□□□□ -1.43
USP4-207ENST00000462673 JMJD1CQ15652 2540 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 TRBV20OR9-2A0A075B6H5 130 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 TRAV41A0A0B4J266 112 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 A0A0G2JLM5 398 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 TCRBV4S1A1TA0A5B7 111 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 PGPEP1LA6NFU8 196 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 ZNF324O75467 553 aaPredicted RBP6.11□□□□□ -1.43
USP4-207ENST00000462673 CA2P00918 260 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 IGLC2P0DOY2 106 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 IGLC3P0DOY3 106 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 PMCHP20382 165 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 LINC00205P59089 165 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 RPL8P62917 257 aaKnown RBP6.11□□□□□ -1.43
USP4-207ENST00000462673 FOXE3Q13461 319 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 TNXAQ16473 311 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 POU2AF1Q16633 256 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 AARDQ4LEZ3 155 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 NDUFA11Q86Y39 141 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 Q8N976 141 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 ZNF738Q8NE65 137 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 TMEM167AQ8TBQ9 72 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 ARPC1AQ92747 370 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 CITED1Q99966 193 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 SRSF8Q9BRL6 282 aaKnown RBP6.11□□□□□ -1.43
USP4-207ENST00000462673 GNB4Q9HAV0 340 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 NRN1Q9NPD7 142 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 TMEM167BQ9NRX6 74 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 THYN1Q9P016 225 aa6.11□□□□□ -1.43
USP4-207ENST00000462673 MRPL27Q9P0M9 148 aaKnown RBP6.11□□□□□ -1.43
USP4-207ENST00000462673 NAT8BQ9UHF3 227 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms