RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 KLF17Q5JT82 389 aaPredicted RBP11.67□□□□□ -0.54
NCL-207ENST00000461347 UTF1Q5T230 341 aa11.67□□□□□ -0.54
NCL-207ENST00000461347 OR5AN1Q8NGI8 311 aa11.67□□□□□ -0.54
NCL-207ENST00000461347 MEGF9Q9H1U4 602 aa11.67□□□□□ -0.54
NCL-207ENST00000461347 A0A1W2PNU3 283 aaPredicted RBP11.67□□□□□ -0.54
NCL-207ENST00000461347 TRGV9Q99603 122 aa11.67□□□□□ -0.54
NCL-207ENST00000461347 OR2T8A6NH00 312 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 HIST1H1AQ02539 215 aaPredicted RBP11.66□□□□□ -0.54
NCL-207ENST00000461347 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 FAM57AQ8TBR7 257 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 RNASE6Q93091 150 aaKnown RBP11.66□□□□□ -0.54
NCL-207ENST00000461347 EXPH5Q8NEV8 1989 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 POU2AF1Q16633 256 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 KLK15Q9H2R5 256 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 KIAA1549Q9HCM3 1950 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 GOSR1O95249 250 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 ARMS2P0C7Q2 107 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 IGHV1-8P0DP01 117 aa11.66□□□□□ -0.54
NCL-207ENST00000461347 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 TMEM178BH3BS89 294 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 CIDEAO60543 219 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 TOMM40O96008 361 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 EBLN2Q6P2I7 272 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 FAM231DQ6ZW35 169 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 DDB2Q92466 427 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 C1RLQ9NZP8 487 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 TRIOO75962 3097 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 IGHV3-66A0A0C4DH42 116 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 SCGB1D4Q6XE38 83 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
NCL-207ENST00000461347 DPM3Q9P2X0 92 aa11.65□□□□□ -0.55
NCL-207ENST00000461347 DNAH14Q0VDD8 3507 aa11.65□□□□□ -0.55
NCL-207ENST00000461347 D6R8Y8 96 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 PPIFP30405 207 aaKnown RBP11.64□□□□□ -0.55
NCL-207ENST00000461347 Q6AWC8 147 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 FXYD5Q96DB9 178 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 TRAV8-6A0A0B4J262 113 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 TIMM23O14925 209 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 NCR2O95944 276 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 CNTFRP26992 372 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 ADIPOQQ15848 244 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 TMEM78Q5T7P6 136 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 CCDC144NLQ6NUI1 221 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 FER1L6-AS1Q8NA97 138 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 C21orf62Q9NYP8 219 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 TP53TG3Q9ULZ0 132 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 PSG9Q00887 426 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 MSMPQ1L6U9 139 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 TMEM160Q9NX00 188 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 SIGLEC9Q9Y336 463 aa11.64□□□□□ -0.55
NCL-207ENST00000461347 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 Q86TA4 180 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 IGHV2-26A0A0B4J1V2 119 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 F5H697 171 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 SMIM17P0DL12 118 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 APOBEC3AP31941 199 aaPredicted RBP11.63□□□□□ -0.55
NCL-207ENST00000461347 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 NDUFS8O00217 210 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 MGPP08493 103 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 RPS20P60866 119 aaKnown RBP11.63□□□□□ -0.55
NCL-207ENST00000461347 FAM169BQ8N8A8 192 aa11.63□□□□□ -0.55
NCL-207ENST00000461347 B9A039 149 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 HBDP02042 147 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 GATA4P43694 442 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 GUSBP1Q15486 140 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 ZNF833PQ6ZTB9 187 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 MS4A6AQ9H2W1 248 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 A0A1B0GW15 77 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 EIF4EBP1Q13541 118 aaPredicted RBP11.62□□□□□ -0.55
NCL-207ENST00000461347 IFI27L1Q96BM0 104 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 SPRY4Q9C004 299 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 SPCS1Q9Y6A9 102 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 COL5A1P20908 1838 aaPredicted RBP11.62□□□□□ -0.55
NCL-207ENST00000461347 IGKV2-40A0A087WW87 121 aaPredicted RBP11.62□□□□□ -0.55
NCL-207ENST00000461347 IGHV1-3A0A0C4DH29 117 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 ZNF207O43670 478 aaKnown RBP11.62□□□□□ -0.55
NCL-207ENST00000461347 IGKV2D-40P01614 121 aaPredicted RBP11.62□□□□□ -0.55
NCL-207ENST00000461347 LYZL1Q6UWQ5 148 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 ABHD17AQ96GS6 310 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 EYSQ5T1H1 3165 aa11.62□□□□□ -0.55
NCL-207ENST00000461347 SMAGPQ0VAQ4 97 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 FOXC2Q99958 501 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 IGLV3-9A0A075B6K5 115 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 SRSF9Q13242 221 aaKnown RBP eCLIP11.61□□□□□ -0.554e-11■■■□□ 15.6
NCL-207ENST00000461347 AMN1Q8IY45 258 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 CCL21O00585 134 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 ESDP10768 282 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 PVRIGQ6DKI7 326 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 LINC00173Q6ZV60 143 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 Q8TAT8 98 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 OTOGLQ3ZCN5 2332 aa11.61□□□□□ -0.55
NCL-207ENST00000461347 CCL25O15444 150 aa11.6□□□□□ -0.55
NCL-207ENST00000461347 NBR2O15453 112 aa11.6□□□□□ -0.55
NCL-207ENST00000461347 IFI27P40305 119 aaPredicted RBP11.6□□□□□ -0.55
NCL-207ENST00000461347 C1orf229Q6ZS94 237 aaPredicted RBP11.6□□□□□ -0.55
NCL-207ENST00000461347 FAM167A-AS1Q96KT0 104 aa11.6□□□□□ -0.55
NCL-207ENST00000461347 NCOR1P1Q9H4R4 102 aa11.6□□□□□ -0.55
NCL-207ENST00000461347 DOPEY2Q9Y3R5 2298 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms