RNA–Protein interactions for RNA: ENST00000445776.1

PSMD4-205, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 3

Gene PSMD4, Length 703 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-205	ENST00000445776	PPP1R14B	Q96C90	147 aa		12.06	□□□□□ -0.48
PSMD4-205	ENST00000445776	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.05	□□□□□ -0.48
PSMD4-205	ENST00000445776	SPINK13	Q1W4C9	94 aa		12.05	□□□□□ -0.48
PSMD4-205	ENST00000445776	SOHLH1	Q5JUK2	328 aa		12.05	□□□□□ -0.48
PSMD4-205	ENST00000445776	IGFL4	Q6B9Z1	124 aa		12.05	□□□□□ -0.48
PSMD4-205	ENST00000445776	ZNRF2	Q8NHG8	242 aa		12.05	□□□□□ -0.48
PSMD4-205	ENST00000445776	BCL7B	Q9BQE9	202 aa		12.05	□□□□□ -0.48
PSMD4-205	ENST00000445776	SLC25A22	Q9H936	323 aa		12.05	□□□□□ -0.48
PSMD4-205	ENST00000445776		M0R2Z0	102 aa		12.04	□□□□□ -0.48
PSMD4-205	ENST00000445776	SYNGR2	O43760	224 aa		12.04	□□□□□ -0.48
PSMD4-205	ENST00000445776	AZU1	P20160	251 aa		12.04	□□□□□ -0.48
PSMD4-205	ENST00000445776	TMBIM6	P55061	237 aa		12.04	□□□□□ -0.48
PSMD4-205	ENST00000445776	TNP2	Q05952	138 aa		12.04	□□□□□ -0.48
PSMD4-205	ENST00000445776	GPR82	Q96P67	336 aa		12.04	□□□□□ -0.48
PSMD4-205	ENST00000445776	TMED3	Q9Y3Q3	217 aa		12.04	□□□□□ -0.48
PSMD4-205	ENST00000445776	FABP12	A6NFH5	140 aa		12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	PMS2P5	A8MQ11	134 aa		12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776		H3BRN7	92 aa		12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	MED6	O75586	246 aa		12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	DUSP14	O95147	198 aa	Known RBP	12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	ORM2	P19652	201 aa		12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	TMED4	Q7Z7H5	227 aa		12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	RNF182	Q8N6D2	247 aa		12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	BPIFC	Q8NFQ6	507 aa		12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	CIB3	Q96Q77	187 aa	Predicted RBP	12.03	□□□□□ -0.48
PSMD4-205	ENST00000445776	SFT2D2	O95562	160 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	INS	P01308	110 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	PLP1	P60201	277 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	B2M	P61769	119 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	PPP1R1A	Q13522	171 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	TMEM144	Q7Z5S9	345 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	BAP18	Q8IXM2	172 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	SHANK2-AS3	Q9BTD1	123 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	TMEM208	Q9BTX3	173 aa		12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.02	□□□□□ -0.49
PSMD4-205	ENST00000445776	NBDY	A0A0U1RRE5	68 aa		12.01	□□□□□ -0.49
PSMD4-205	ENST00000445776	WRB	O00258	174 aa		12.01	□□□□□ -0.49
PSMD4-205	ENST00000445776	CDK2AP2	O75956	126 aa		12.01	□□□□□ -0.49
PSMD4-205	ENST00000445776	RPP30	P78346	268 aa	Known RBP	12.01	□□□□□ -0.49
PSMD4-205	ENST00000445776	ID3	Q02535	119 aa		12.01	□□□□□ -0.49
PSMD4-205	ENST00000445776	FCN2	Q15485	313 aa		12.01	□□□□□ -0.49
PSMD4-205	ENST00000445776	ACOT7L	Q6ZUV0	252 aa		12.01	□□□□□ -0.49
PSMD4-205	ENST00000445776	TMEM147	Q9BVK8	224 aa		12.01	□□□□□ -0.49
PSMD4-205	ENST00000445776	TRAV12-2	A0A075B6T6	113 aa		12	□□□□□ -0.49
PSMD4-205	ENST00000445776		A0A087X0K7	114 aa		12	□□□□□ -0.49
PSMD4-205	ENST00000445776	MRPS12	O15235	138 aa	Known RBP	12	□□□□□ -0.49
PSMD4-205	ENST00000445776	SPANXN5	Q5MJ07	72 aa		12	□□□□□ -0.49
PSMD4-205	ENST00000445776	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12	□□□□□ -0.49
PSMD4-205	ENST00000445776	PAIP2B	Q9ULR5	123 aa	Known RBP	12	□□□□□ -0.49
PSMD4-205	ENST00000445776	LINC00588	Q9Y4M8	146 aa		12	□□□□□ -0.49
PSMD4-205	ENST00000445776		V9GYH0	126 aa		12	□□□□□ -0.49
PSMD4-205	ENST00000445776	CBY3	A6NI87	242 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776		H3BMQ9	156 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776		H3BP45	60 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	BOLA2-SMG1P6	H3BVE0	249 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	DEFB130B	P0DP73	79 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	DEFB130A	P0DP74	79 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	CXCL3	P19876	107 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	VAMP1	P23763	118 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	FAU	P35544	74 aa	Known RBP	11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	CYP2G1P	Q6ZSU1	146 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	C6orf223	Q8N319	242 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	OR8A1	Q8NGG7	326 aa		11.99	□□□□□ -0.49
PSMD4-205	ENST00000445776	HOXB5	P09067	269 aa		11.98	□□□□□ -0.49
PSMD4-205	ENST00000445776	PATE2	Q6UY27	113 aa		11.98	□□□□□ -0.49
PSMD4-205	ENST00000445776	TOMM5	Q8N4H5	51 aa		11.98	□□□□□ -0.49
PSMD4-205	ENST00000445776	DEDD2	Q8WXF8	326 aa		11.98	□□□□□ -0.49
PSMD4-205	ENST00000445776	BATF3	Q9NR55	127 aa		11.98	□□□□□ -0.49
PSMD4-205	ENST00000445776	STRAP	Q9Y3F4	350 aa	Known RBP	11.98	□□□□□ -0.49
PSMD4-205	ENST00000445776		F5H768	121 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776		K7EPK0	472 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	RPL7	P18124	248 aa	Known RBP	11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	S100A7	P31151	101 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	TAS2R60	P59551	318 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	AKR1C1	Q04828	323 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	TMEM256	Q8N2U0	113 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	LINC00612	Q8N6U2	182 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	ZNF738	Q8NE65	137 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	MCFD2	Q8NI22	146 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	RNASE8	Q8TDE3	154 aa	Known RBP	11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	RNF141	Q8WVD5	230 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	ATG101	Q9BSB4	218 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	HIGD1A	Q9Y241	93 aa		11.97	□□□□□ -0.49
PSMD4-205	ENST00000445776	C16orf90	A8MZG2	172 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	HYPM	O75409	117 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	IL5	P05113	134 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	ATP5G1	P05496	136 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	ATP5G3	P48201	142 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	AP3S2	P59780	193 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	POLR2G	P62487	172 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	FGL1	Q08830	312 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	PSG3	Q16557	428 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	UHRF2	Q96PU4	802 aa		11.96	□□□□□ -0.49
PSMD4-205	ENST00000445776	ADAP1	O75689	374 aa		11.95	□□□□□ -0.5
PSMD4-205	ENST00000445776	CCNK	O75909	580 aa		11.95	□□□□□ -0.5
PSMD4-205	ENST00000445776	NUDT3	O95989	172 aa		11.95	□□□□□ -0.5
PSMD4-205	ENST00000445776	LINC00869	P0C866	280 aa		11.95	□□□□□ -0.5
PSMD4-205	ENST00000445776	UBE2M	P61081	183 aa	Known RBP	11.95	□□□□□ -0.5
PSMD4-205	ENST00000445776	HIST1H1A	Q02539	215 aa	Predicted RBP	11.95	□□□□□ -0.5
PSMD4-205	ENST00000445776	TMEM14EP	Q6UXP3	125 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 111 ms