RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TGFAP01135 160 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 AVPP01185 164 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 TRGC1P0CF51 173 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 ADMP35318 185 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 RELQ04864 619 aaPredicted RBP12.21□□□□□ -0.45
SNX13-204ENST00000444712 LY6EQ16553 131 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 PRSS57Q6UWY2 283 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 FRZBQ92765 325 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 MBD6Q96DN6 1003 aa12.21□□□□□ -0.45
SNX13-204ENST00000444712 TRBV6-1A0A0K0K1D8 114 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 S100A8P05109 93 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.46
SNX13-204ENST00000444712 PSG9Q00887 426 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 ACTL10Q5JWF8 245 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 ZNF414Q96IQ9 312 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 LINC00479Q96M42 142 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 AAMDCQ9H7C9 122 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 ZNF580Q9UK33 172 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 RPH3ALQ9UNE2 315 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 ABCA1O95477 2261 aa12.21□□□□□ -0.46
SNX13-204ENST00000444712 TRAV34A0A0B4J273 112 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 SLC17A3O00476 420 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 PHOX2AO14813 284 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 CLEC3BP05452 202 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 NDUFA6P56556 154 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 COX19Q49B96 90 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 Q5PR19 223 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 ARL6IP6Q8N6S5 226 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
SNX13-204ENST00000444712 SERTM2A0A1B0GWG4 89 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 RNF223E7ERA6 249 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 HOXA5P20719 270 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 COL8A1P27658 744 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 KRTAP10-9P60411 292 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 SIGLEC15Q6ZMC9 328 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 CCDC140Q96MF4 163 aa12.2□□□□□ -0.46
SNX13-204ENST00000444712 ZNF705GA8MUZ8 300 aaPredicted RBP12.19□□□□□ -0.46
SNX13-204ENST00000444712 H3BTX0 84 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 ZNF253O75346 499 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 LTAP01374 205 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 CLEC19AQ6UXS0 136 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 OR5R1Q8NH85 324 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 USMG5Q96IX5 58 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 MS4A10Q96PG2 267 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 GNB4Q9HAV0 340 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 ZFYVE26Q68DK2 2539 aa12.19□□□□□ -0.46
SNX13-204ENST00000444712 GATCO43716 136 aaKnown RBP12.18□□□□□ -0.46
SNX13-204ENST00000444712 TRGV3P03979 118 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 IGHV4-31P0DP07 118 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 OR8I2Q8N0Y5 310 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 TMEM75Q8N9X5 138 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 ZFAND3Q9H8U3 227 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 SERTAD4Q9NUC0 356 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 CR1P17927 2039 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 EXOC3-AS1Q8N2X6 119 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 ZNF492Q9P255 531 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 TRAPPC1Q9Y5R8 145 aa12.18□□□□□ -0.46
SNX13-204ENST00000444712 COL12A1Q99715 3063 aa12.17□□□□□ -0.46
SNX13-204ENST00000444712 CSN1S1P47710 185 aa12.17□□□□□ -0.46
SNX13-204ENST00000444712 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
SNX13-204ENST00000444712 RPL15P61313 204 aaKnown RBP12.17□□□□□ -0.46
SNX13-204ENST00000444712 C9orf139Q6ZV77 190 aa12.17□□□□□ -0.46
SNX13-204ENST00000444712 Q86TA4 180 aa12.17□□□□□ -0.46
SNX13-204ENST00000444712 NHLRC2Q8NBF2 726 aa12.17□□□□□ -0.46
SNX13-204ENST00000444712 GRAMD2BQ96HH9 432 aa12.17□□□□□ -0.46
SNX13-204ENST00000444712 SOX21Q9Y651 276 aaPredicted RBP12.17□□□□□ -0.46
SNX13-204ENST00000444712 ANKRD17O75179 2603 aaKnown RBP12.17□□□□□ -0.46
SNX13-204ENST00000444712 SMIM27A0A1W2PRY6 76 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
SNX13-204ENST00000444712 J3QKU1 62 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 PPIFP30405 207 aaKnown RBP12.16□□□□□ -0.46
SNX13-204ENST00000444712 TPPP2P59282 170 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 C1orf194Q5T5A4 169 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 WDR73Q6P4I2 378 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 GOLT1AQ6ZVE7 132 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 TMEM183AQ8IXX5 376 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 LINC00518Q8N0U6 118 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 FSHBP01225 129 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 METTL26Q96S19 204 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 ZFP30Q9Y2G7 519 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 FAM208BQ5VWN6 2430 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
SNX13-204ENST00000444712 MT-ND6P03923 174 aa12.15□□□□□ -0.46
SNX13-204ENST00000444712 MEOX2P50222 304 aa12.15□□□□□ -0.46
SNX13-204ENST00000444712 CT83Q5H943 113 aa12.15□□□□□ -0.46
SNX13-204ENST00000444712 BCL6BQ8N143 479 aaPredicted RBP12.15□□□□□ -0.46
SNX13-204ENST00000444712 NUDT10Q8NFP7 164 aa12.15□□□□□ -0.46
SNX13-204ENST00000444712 NUDT11Q96G61 164 aa12.15□□□□□ -0.46
SNX13-204ENST00000444712 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
SNX13-204ENST00000444712 A0A087X0K7 114 aa12.15□□□□□ -0.47
SNX13-204ENST00000444712 A0A0G2JLM5 398 aa12.15□□□□□ -0.47
SNX13-204ENST00000444712 DIRC3C9JPN6 131 aa12.15□□□□□ -0.47
SNX13-204ENST00000444712 PLA2G2AP14555 144 aa12.15□□□□□ -0.47
SNX13-204ENST00000444712 IER3P46695 156 aa12.15□□□□□ -0.47
SNX13-204ENST00000444712 FAM209BQ5JX69 171 aa12.15□□□□□ -0.47
SNX13-204ENST00000444712 PRR27Q6MZM9 219 aa12.15□□□□□ -0.47
SNX13-204ENST00000444712 DAZAP1Q96EP5 407 aaKnown RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 310.3 ms