RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TMEM14EPQ6UXP3 125 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 LINC00527Q9UJ94 153 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 LY96Q9Y6Y9 160 aa12.95□□□□□ -0.34
PTPN13-204ENST00000436978 TRGV1A0A0A0MS02 117 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 S100A7L2Q5SY68 101 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 AGMATQ9BSE5 352 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 J3QLI3 93 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 PRTN3P24158 256 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 Q8TCH9 128 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 DPH3P1Q9H4G8 78 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 COL8A2P25067 703 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 GATA4P43694 442 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 LCN12Q6JVE5 192 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 FOXL1Q12952 345 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 GLRX5Q86SX6 157 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 C5orf30Q96GV9 206 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 GVINP1Q7Z2Y8 2422 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 TRAV5A0A0B4J249 113 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 A0A1B0GWB2 263 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 C3orf56Q8N813 242 aa12.94□□□□□ -0.34
PTPN13-204ENST00000436978 QRFPP83859 136 aa12.93□□□□□ -0.34
PTPN13-204ENST00000436978 SP5Q6BEB4 398 aaPredicted RBP12.93□□□□□ -0.34
PTPN13-204ENST00000436978 AMBPP02760 352 aa12.93□□□□□ -0.34
PTPN13-204ENST00000436978 RPL35AP18077 110 aaKnown RBP12.93□□□□□ -0.34
PTPN13-204ENST00000436978 Q5PR19 223 aa12.93□□□□□ -0.34
PTPN13-204ENST00000436978 TRAV9-2A0A087WT02 112 aa12.93□□□□□ -0.34
PTPN13-204ENST00000436978 A0A1B0GV90 55 aa12.93□□□□□ -0.34
PTPN13-204ENST00000436978 H0YIZ8 118 aa12.93□□□□□ -0.34
PTPN13-204ENST00000436978 HOXA3O43365 443 aaPredicted RBP12.93□□□□□ -0.34
PTPN13-204ENST00000436978 ERCC8Q13216 396 aa12.93□□□□□ -0.34
PTPN13-204ENST00000436978 TEX43Q6ZNM6 134 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 TRAV12-3A0A0B4J271 114 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 VCYO14598 125 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 PSCAO43653 123 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 SPCS1Q9Y6A9 102 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 ZNF815PA8K554 130 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 TCRAP04437 139 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 PPIFP30405 207 aaKnown RBP12.92□□□□□ -0.34
PTPN13-204ENST00000436978 DEFB121Q5J5C9 76 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 ASCL4Q6XD76 172 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 SH2D1AO60880 128 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 NDUFB8O95169 186 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 IGKV1-5P01602 117 aa12.92□□□□□ -0.34
PTPN13-204ENST00000436978 FCN3O75636 299 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 ST6GALNAC6Q969X2 333 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 RFNGQ9Y644 331 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 LINC00473A8K010 186 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 SNAI2O43623 268 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 SRSF6Q13247 344 aaKnown RBP12.91□□□□□ -0.34
PTPN13-204ENST00000436978 C10orf55Q5SWW7 151 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 LYPD2Q6UXB3 125 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 WFDC12Q8WWY7 111 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 NDPQ00604 133 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 MS4A6AQ9H2W1 248 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 NCOR1O75376 2440 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 PLEKHB2Q96CS7 222 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 LAMTOR2Q9Y2Q5 125 aa12.91□□□□□ -0.34
PTPN13-204ENST00000436978 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 TRAV3A0A0B4J244 114 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 LINC00158P58513 81 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 M0R2P5 195 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 D6R8Y8 96 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 TMEM75Q8N9X5 138 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 NCOR1P1Q9H4R4 102 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 VSIRQ9H7M9 311 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 GGTLC3B5MD39 225 aa12.9□□□□□ -0.34
PTPN13-204ENST00000436978 IGHV2-70DA0A0C4DH43 119 aa12.9□□□□□ -0.35
PTPN13-204ENST00000436978 C1QL4Q86Z23 238 aa12.9□□□□□ -0.35
PTPN13-204ENST00000436978 GFRA4Q9GZZ7 299 aa12.9□□□□□ -0.35
PTPN13-204ENST00000436978 CFPP27918 469 aa12.89□□□□□ -0.35
PTPN13-204ENST00000436978 TDGF1P3P51864 188 aa12.89□□□□□ -0.35
PTPN13-204ENST00000436978 LINC01619G3V211 115 aa12.89□□□□□ -0.35
PTPN13-204ENST00000436978 PLA2G2CQ5R387 149 aa12.89□□□□□ -0.35
PTPN13-204ENST00000436978 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
PTPN13-204ENST00000436978 SRSF3P84103 164 aaKnown RBP12.89□□□□□ -0.35
PTPN13-204ENST00000436978 RASL10AQ92737 203 aa12.89□□□□□ -0.35
PTPN13-204ENST00000436978 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.88□□□□□ -0.35
PTPN13-204ENST00000436978 GZMBP10144 247 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 RHPN1-AS1Q9BWJ2 59 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 GFI1BQ5VTD9 330 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 IGHV1-69DA0A0B4J2H0 117 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 IGHV1-69P01742 117 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 LYZL1Q6UWQ5 148 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 CLDN16Q9Y5I7 305 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 CA1P00915 261 aaPredicted RBP12.88□□□□□ -0.35
PTPN13-204ENST00000436978 FAM110DQ8TAY7 271 aaPredicted RBP12.88□□□□□ -0.35
PTPN13-204ENST00000436978 ARFGEF3Q5TH69 2177 aa12.88□□□□□ -0.35
PTPN13-204ENST00000436978 HIST1H2BKO60814 126 aa12.87□□□□□ -0.35
PTPN13-204ENST00000436978 HIST1H2BJP06899 126 aa12.87□□□□□ -0.35
PTPN13-204ENST00000436978 HIST1H2BOP23527 126 aa12.87□□□□□ -0.35
PTPN13-204ENST00000436978 HIST1H2BBP33778 126 aa12.87□□□□□ -0.35
PTPN13-204ENST00000436978 HIST1H2BDP58876 126 aa12.87□□□□□ -0.35
PTPN13-204ENST00000436978 HIST1H2BCP62807 126 aa12.87□□□□□ -0.35
PTPN13-204ENST00000436978 HIST2H2BEQ16778 126 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms