RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 OXA1LQ15070 435 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 SPANXN5Q5MJ07 72 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 AMTNQ6UX39 209 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 ACOT7LQ6ZUV0 252 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 OR1B1Q8NGR6 318 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 GPR82Q96P67 336 aa12.63□□□□□ -0.39
GPC1-203ENST00000425056 PKHD1P08F94 4074 aa12.62□□□□□ -0.39
GPC1-203ENST00000425056 LOC102723971A0A1B0GUV8 181 aa12.62□□□□□ -0.39
GPC1-203ENST00000425056 A0A1B0GVY2 172 aa12.62□□□□□ -0.39
GPC1-203ENST00000425056 H3BP45 60 aa12.62□□□□□ -0.39
GPC1-203ENST00000425056 GATA2P23769 480 aaPredicted RBP12.62□□□□□ -0.39
GPC1-203ENST00000425056 TMEM182Q6ZP80 229 aaPredicted RBP12.62□□□□□ -0.39
GPC1-203ENST00000425056 RSG1Q9BU20 258 aa12.62□□□□□ -0.39
GPC1-203ENST00000425056 TMEM147Q9BVK8 224 aa12.62□□□□□ -0.39
GPC1-203ENST00000425056 STRAPQ9Y3F4 350 aaKnown RBP12.62□□□□□ -0.39
GPC1-203ENST00000425056 ORM2P19652 201 aa12.61□□□□□ -0.39
GPC1-203ENST00000425056 S100A7P31151 101 aa12.61□□□□□ -0.39
GPC1-203ENST00000425056 RRN3P1Q2M238 152 aa12.61□□□□□ -0.39
GPC1-203ENST00000425056 TMEM144Q7Z5S9 345 aa12.61□□□□□ -0.39
GPC1-203ENST00000425056 IGF2BP2-AS1Q96M15 143 aa12.61□□□□□ -0.39
GPC1-203ENST00000425056 YTHDF2Q9Y5A9 579 aaKnown RBP12.61□□□□□ -0.39
GPC1-203ENST00000425056 H3BRN7 92 aa12.6□□□□□ -0.39
GPC1-203ENST00000425056 ID3Q02535 119 aa12.6□□□□□ -0.39
GPC1-203ENST00000425056 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
GPC1-203ENST00000425056 DNAH17Q9UFH2 4485 aa12.6□□□□□ -0.39
GPC1-203ENST00000425056 C9orf170A2RU37 121 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 RTL8CO15255 209 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 LYRM1O43325 122 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 ADAP1O75689 374 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
GPC1-203ENST00000425056 DEFA1P59665 94 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 DEFA3P59666 94 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 POLR2GP62487 172 aaKnown RBP eCLIP12.59□□□□□ -0.39
GPC1-203ENST00000425056 MZT2BQ6NZ67 158 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 CYP2G1PQ6ZSU1 146 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 PLA2G2EQ9NZK7 142 aa12.59□□□□□ -0.39
GPC1-203ENST00000425056 TRAV8-2A0A0B4J237 113 aa12.58□□□□□ -0.4
GPC1-203ENST00000425056 LINC00854A0A1B0GVQ3 168 aa12.58□□□□□ -0.4
GPC1-203ENST00000425056 PLA2G10O15496 165 aa12.58□□□□□ -0.4
GPC1-203ENST00000425056 DUSP14O95147 198 aaKnown RBP12.58□□□□□ -0.4
GPC1-203ENST00000425056 ASAH1Q13510 395 aa12.58□□□□□ -0.4
GPC1-203ENST00000425056 OR11H7Q8NGC8 314 aa12.58□□□□□ -0.4
GPC1-203ENST00000425056 SHANK2-AS3Q9BTD1 123 aa12.58□□□□□ -0.4
GPC1-203ENST00000425056 TMEM208Q9BTX3 173 aa12.58□□□□□ -0.4
GPC1-203ENST00000425056 SLC25A39Q9BZJ4 359 aaPredicted RBP12.58□□□□□ -0.4
GPC1-203ENST00000425056 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 PMS2P5A8MQ11 134 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 M0R2N4 97 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 M0R2Z0 102 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 CRXO43186 299 aaPredicted RBP12.57□□□□□ -0.4
GPC1-203ENST00000425056 NDUFB6O95139 128 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 INSP01308 110 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 IFNA21P01568 189 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 IL5P05113 134 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 HTN3P15516 51 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 PLP1P60201 277 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 DAD1P61803 113 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 IFITM3Q01628 133 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 SPINK13Q1W4C9 94 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 UBE2DNLQ8IWF7 75 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 RNF182Q8N6D2 247 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 PSENENQ9NZ42 101 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 HIGD1AQ9Y241 93 aa12.57□□□□□ -0.4
GPC1-203ENST00000425056 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
GPC1-203ENST00000425056 SSSCA1O60232 199 aa12.56□□□□□ -0.4
GPC1-203ENST00000425056 LINC00869P0C866 280 aa12.56□□□□□ -0.4
GPC1-203ENST00000425056 RPL7P18124 248 aaKnown RBP12.56□□□□□ -0.4
GPC1-203ENST00000425056 RAP2BP61225 183 aa12.56□□□□□ -0.4
GPC1-203ENST00000425056 SELENOTP62341 195 aa12.56□□□□□ -0.4
GPC1-203ENST00000425056 RNF212Q495C1 297 aa12.56□□□□□ -0.4
GPC1-203ENST00000425056 IGFL4Q6B9Z1 124 aa12.56□□□□□ -0.4
GPC1-203ENST00000425056 Q6ZR54 194 aa12.56□□□□□ -0.4
GPC1-203ENST00000425056 A0A087X0K7 114 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 HYPMO75409 117 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 TSPOP30536 169 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 DLK1P80370 383 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 FGL1Q08830 312 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 ZNF738Q8NE65 137 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 SMIM8Q96KF7 97 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 FLVCR2Q9UPI3 526 aa12.55□□□□□ -0.4
GPC1-203ENST00000425056 LYRM9A8MSI8 78 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 FNDC10F2Z333 226 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 BOLA2-SMG1P6H3BVE0 249 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 K7EPK0 472 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 CCNKO75909 580 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 OR4E1P0C645 316 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 BTCP35070 178 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 B2MP61769 119 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 BAP18Q8IXM2 172 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 UHRF2Q96PU4 802 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 PCLOQ9Y6V0 5065 aa12.54□□□□□ -0.4
GPC1-203ENST00000425056 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
GPC1-203ENST00000425056 FAM240BA0A1B0GVZ2 78 aa12.53□□□□□ -0.4
GPC1-203ENST00000425056 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
GPC1-203ENST00000425056 OR5G3P0C626 314 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms