RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 IAH1Q2TAA2 248 aaPredicted RBP15.32■□□□□ 0.04
PTPN4-202ENST00000420482 ZNF767PQ75MW2 155 aa15.32■□□□□ 0.04
PTPN4-202ENST00000420482 OR10P1Q8NGE3 313 aa15.32■□□□□ 0.04
PTPN4-202ENST00000420482 TMEM208Q9BTX3 173 aa15.32■□□□□ 0.04
PTPN4-202ENST00000420482 SLC35B3Q9H1N7 401 aa15.32■□□□□ 0.04
PTPN4-202ENST00000420482 NPVFQ9HCQ7 196 aa15.32■□□□□ 0.04
PTPN4-202ENST00000420482 F6UB75 175 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 P0DMU3 169 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 FAM231AP0DMU4 169 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 FAM231CP0DMU5 169 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 ANXA7P20073 488 aaKnown RBP15.31■□□□□ 0.04
PTPN4-202ENST00000420482 TAS2R30P59541 319 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 DLK1P80370 383 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 PRR20EP86478 221 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 PRR20CP86479 221 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 PRR20DP86480 221 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 PRR20BP86481 221 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 PRR20AP86496 221 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 FGL1Q08830 312 aa15.31■□□□□ 0.04
PTPN4-202ENST00000420482 SLC25A39Q9BZJ4 359 aaPredicted RBP15.31■□□□□ 0.04
PTPN4-202ENST00000420482 OR5G3P0C626 314 aa15.3■□□□□ 0.04
PTPN4-202ENST00000420482 LINC00869P0C866 280 aa15.3■□□□□ 0.04
PTPN4-202ENST00000420482 IL7P13232 177 aa15.3■□□□□ 0.04
PTPN4-202ENST00000420482 RRN3P1Q2M238 152 aa15.3■□□□□ 0.04
PTPN4-202ENST00000420482 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.3■□□□□ 0.04
PTPN4-202ENST00000420482 TMEM182Q6ZP80 229 aaPredicted RBP15.3■□□□□ 0.04
PTPN4-202ENST00000420482 GSKIPQ9P0R6 139 aa15.3■□□□□ 0.04
PTPN4-202ENST00000420482 H3BRN7 92 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 TSC22D2O75157 780 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 PLP1P60201 277 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 RRAS2P62070 204 aaPredicted RBP15.29■□□□□ 0.04
PTPN4-202ENST00000420482 ZNF846Q147U1 533 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 TEPPQ6URK8 271 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 MITD1Q8WV92 249 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 FAM210BQ96KR6 192 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 SHANK2-AS3Q9BTD1 123 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 SCRT1Q9BWW7 348 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 VPS13DQ5THJ4 4388 aa15.29■□□□□ 0.04
PTPN4-202ENST00000420482 DNAH6Q9C0G6 4158 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 HECTD4Q9Y4D8 3996 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 METTL15P1P0C7V9 234 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 PXDC1Q5TGL8 231 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 TMEM14EPQ6UXP3 125 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 ZBTB8BQ8NAP8 495 aaPredicted RBP15.28■□□□□ 0.04
PTPN4-202ENST00000420482 LRRC20Q8TCA0 184 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 C20orf173Q96LM9 149 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 IGF2BP2-AS1Q96M15 143 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 NIPSNAP3BQ9BS92 247 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 NDUFA13Q9P0J0 144 aa15.28■□□□□ 0.04
PTPN4-202ENST00000420482 LOC102723971A0A1B0GUV8 181 aa15.27■□□□□ 0.04
PTPN4-202ENST00000420482 PMS2P5A8MQ11 134 aa15.27■□□□□ 0.04
PTPN4-202ENST00000420482 BTCP35070 178 aa15.27■□□□□ 0.04
PTPN4-202ENST00000420482 B2MP61769 119 aa15.27■□□□□ 0.04
PTPN4-202ENST00000420482 ZNF738Q8NE65 137 aa15.27■□□□□ 0.04
PTPN4-202ENST00000420482 SDHCQ99643 169 aaPredicted RBP15.27■□□□□ 0.04
PTPN4-202ENST00000420482 DKK2Q9UBU2 259 aa15.27■□□□□ 0.04
PTPN4-202ENST00000420482 A8MTW9 85 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 L7N2F9 121 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 GOSR2O14653 212 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 INSP01308 110 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 CNN1P51911 297 aaKnown RBP15.26■□□□□ 0.03
PTPN4-202ENST00000420482 VAMP2P63027 116 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 OXA1LQ15070 435 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 FAM222AQ5U5X8 452 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 ZNF546Q86UE3 836 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 GGACTQ9BVM4 153 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 ARL6Q9H0F7 186 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 C20orf85Q9H1P6 137 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 PPP1R14DQ9NXH3 145 aa15.26■□□□□ 0.03
PTPN4-202ENST00000420482 K7EPK0 472 aa15.25■□□□□ 0.03
PTPN4-202ENST00000420482 GSG1LQ6UXU4 331 aa15.25■□□□□ 0.03
PTPN4-202ENST00000420482 C1orf158Q8N1D5 194 aa15.25■□□□□ 0.03
PTPN4-202ENST00000420482 POM121L12Q8N7R1 296 aa15.25■□□□□ 0.03
PTPN4-202ENST00000420482 YTHDF2Q9Y5A9 579 aaKnown RBP15.25■□□□□ 0.03
PTPN4-202ENST00000420482 LYRM1O43325 122 aa15.24■□□□□ 0.03
PTPN4-202ENST00000420482 AMTNQ6UX39 209 aa15.24■□□□□ 0.03
PTPN4-202ENST00000420482 RNF182Q8N6D2 247 aa15.24■□□□□ 0.03
PTPN4-202ENST00000420482 C17orf77Q96MU5 243 aa15.24■□□□□ 0.03
PTPN4-202ENST00000420482 UHRF2Q96PU4 802 aa15.24■□□□□ 0.03
PTPN4-202ENST00000420482 A0A087X0K7 114 aa15.23■□□□□ 0.03
PTPN4-202ENST00000420482 CCNKO75909 580 aa15.23■□□□□ 0.03
PTPN4-202ENST00000420482 SLC38A11Q08AI6 406 aa15.23■□□□□ 0.03
PTPN4-202ENST00000420482 SPINK13Q1W4C9 94 aa15.23■□□□□ 0.03
PTPN4-202ENST00000420482 OR11H7Q8NGC8 314 aa15.23■□□□□ 0.03
PTPN4-202ENST00000420482 ARV1Q9H2C2 271 aa15.23■□□□□ 0.03
PTPN4-202ENST00000420482 RCL1Q9Y2P8 373 aaKnown RBP15.23■□□□□ 0.03
PTPN4-202ENST00000420482 TRAV8-2A0A0B4J237 113 aa15.22■□□□□ 0.03
PTPN4-202ENST00000420482 C7orf66A4D0T2 115 aa15.22■□□□□ 0.03
PTPN4-202ENST00000420482 MBPP02686 304 aaPredicted RBP15.22■□□□□ 0.03
PTPN4-202ENST00000420482 DAD1P61803 113 aa15.22■□□□□ 0.03
PTPN4-202ENST00000420482 RHOBP62745 196 aa15.22■□□□□ 0.03
PTPN4-202ENST00000420482 RAB31Q13636 194 aa15.22■□□□□ 0.03
PTPN4-202ENST00000420482 IGFL4Q6B9Z1 124 aa15.22■□□□□ 0.03
PTPN4-202ENST00000420482 FAM25EA8MYX2 175 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 BOLA2-SMG1P6H3BVE0 249 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 M0R2Z0 102 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 AGPAT2O15120 278 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 TCRBP04435 133 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 CXCL2P19875 107 aa15.21■□□□□ 0.03
PTPN4-202ENST00000420482 CXCL3P19876 107 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms