RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 CST9LQ9H4G1 147 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 IGHV1-3A0A0C4DH29 117 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 GATA3P23771 443 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 LEPP41159 167 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 GAGE1Q13065 139 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 KLRD1Q13241 179 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 TMEM170BQ5T4T1 132 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 NPFFO15130 113 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 MOB4Q9Y3A3 225 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 TRAV5A0A0B4J249 113 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 A0A1B0GWJ7 208 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 PRCDQ00LT1 54 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 ANAPC13Q9BS18 74 aa10.44□□□□□ -0.74
SCAF8-203ENST00000417268 FOXA2Q9Y261 457 aaPredicted RBP10.44□□□□□ -0.74
SCAF8-203ENST00000417268 SCGB1A1P11684 91 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 GUSBP1Q15486 140 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 FAM53AQ6NSI3 398 aaPredicted RBP10.43□□□□□ -0.74
SCAF8-203ENST00000417268 MBNL3Q9NUK0 354 aaKnown RBP10.43□□□□□ -0.74
SCAF8-203ENST00000417268 VDAC2P45880 294 aaPredicted RBP10.43□□□□□ -0.74
SCAF8-203ENST00000417268 Q6ZWC4 215 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 IFI27L1Q96BM0 104 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 MGST2Q99735 147 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 MRPL27Q9P0M9 148 aaKnown RBP10.43□□□□□ -0.74
SCAF8-203ENST00000417268 MSMBP08118 114 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 ESDP10768 282 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 FER1L6-AS1Q8NA97 138 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 HS3ST6Q96QI5 342 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 SCGB3A1Q96QR1 104 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 SYS1-DBNDD2H3BUS1 97 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 IGLC2P0DOY2 106 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 IGLC3P0DOY3 106 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 Q0VG73 95 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 NCOR1P1Q9H4R4 102 aa10.43□□□□□ -0.74
SCAF8-203ENST00000417268 DOCK10Q96BY6 2186 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 BUB1B-PAK6H3BSN5 160 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 ITGB1BP1O14713 200 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 TSPAN13O95857 204 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 ZNF585BQ52M93 769 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 S4R3C0 116 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 CD5LO43866 347 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 IGLV3-1P01715 115 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 GRNP28799 593 aaKnown RBP10.42□□□□□ -0.74
SCAF8-203ENST00000417268 CD69Q07108 199 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 GAGE13Q4V321 117 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 MCRIP2Q9BUT9 160 aaKnown RBP10.42□□□□□ -0.74
SCAF8-203ENST00000417268 TRAV8-2A0A0B4J237 113 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 RNF223E7ERA6 249 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 ERVK11-1P61568 191 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 LY96Q9Y6Y9 160 aa10.42□□□□□ -0.74
SCAF8-203ENST00000417268 PRB1P04280 392 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 BRD3OSQ6XYD6 125 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 WDR86Q86TI4 376 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 VCX2Q9H322 139 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.41□□□□□ -0.74
SCAF8-203ENST00000417268 IGHV3-23P01764 117 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 CLEC19AQ6UXS0 136 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 Q8NA96 180 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 C1orf147Q96MC9 270 aaPredicted RBP10.41□□□□□ -0.74
SCAF8-203ENST00000417268 OTORQ9NRC9 128 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 TMEM131Q92545 1883 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 SNRPD3P62318 126 aaKnown RBP10.41□□□□□ -0.74
SCAF8-203ENST00000417268 PRSS8Q16651 343 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 FAM71F2Q6NXP2 309 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 RASL11AQ6T310 242 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 C10orf126Q8N4M7 172 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 KIR2DL4Q99706 377 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 H3BUX3 64 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 CKS1BP61024 79 aa10.41□□□□□ -0.74
SCAF8-203ENST00000417268 BCL6BQ8N143 479 aaPredicted RBP10.41□□□□□ -0.74
SCAF8-203ENST00000417268 IGHV3OR16-13A0A075B7E8 117 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 IGHV3-74A0A0B4J1X5 117 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 SHISA9B4DS77 424 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 DPM2O94777 84 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 OR5AN1Q8NGI8 311 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 ANAPC10Q9UM13 185 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 DENND4AQ7Z401 1863 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 IGHV3-11P01762 117 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 M0R381 172 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 RHOGP84095 191 aa10.4□□□□□ -0.74
SCAF8-203ENST00000417268 ZNF138P52744 262 aa10.4□□□□□ -0.75
SCAF8-203ENST00000417268 KIR3DS1Q14943 382 aa10.4□□□□□ -0.75
SCAF8-203ENST00000417268 TCRBV4S1A1TA0A5B7 111 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 ZNF726P1Q15940 193 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 SEM1Q6ZVN7 128 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 H0YJW9 148 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 TMEM167AQ8TBQ9 72 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 LIME1Q9H400 295 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 ADORA2A-AS1P86434 159 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 LYPD6BQ8NI32 183 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 PRORYQ9H606 182 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 HOXA3O43365 443 aaPredicted RBP10.39□□□□□ -0.75
SCAF8-203ENST00000417268 PAX9P55771 341 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 PAX2Q02962 417 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 IL15RAQ13261 267 aa10.39□□□□□ -0.75
SCAF8-203ENST00000417268 STPG4Q8N801 248 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms