RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
SS18-203ENST00000415083 BUB1B-PAK6H3BSN5 160 aa7.79□□□□□ -1.16
SS18-203ENST00000415083 CRYABP02511 175 aaKnown RBP7.79□□□□□ -1.16
SS18-203ENST00000415083 HIST1H1EP10412 219 aaKnown RBP7.79□□□□□ -1.16
SS18-203ENST00000415083 LRRC10Q5BKY1 277 aa7.79□□□□□ -1.16
SS18-203ENST00000415083 ATP5L2Q7Z4Y8 100 aa7.79□□□□□ -1.16
SS18-203ENST00000415083 SLC25A39Q9BZJ4 359 aaPredicted RBP7.79□□□□□ -1.16
SS18-203ENST00000415083 CEP295Q9C0D2 2601 aa7.79□□□□□ -1.16
SS18-203ENST00000415083 K7EIM0 57 aa7.79□□□□□ -1.16
SS18-203ENST00000415083 RPL27AP46776 148 aaKnown RBP7.79□□□□□ -1.16
SS18-203ENST00000415083 HBBP68871 147 aa7.79□□□□□ -1.16
SS18-203ENST00000415083 VMA21Q3ZAQ7 101 aa7.79□□□□□ -1.16
SS18-203ENST00000415083 TRAV9-2A0A087WT02 112 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 KLK10O43240 276 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 FAM106CPP0CH98 169 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 GRNP28799 593 aaKnown RBP7.78□□□□□ -1.16
SS18-203ENST00000415083 CA7P43166 264 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 UBE2G1P62253 170 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 VAMP3Q15836 100 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 FAM106AQ4KMX7 169 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 RIF1Q5UIP0 2472 aaKnown RBP7.78□□□□□ -1.16
SS18-203ENST00000415083 COX11Q9Y6N1 276 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 LOC102724200A0A096LPH7 203 aaPredicted RBP7.78□□□□□ -1.16
SS18-203ENST00000415083 F8W735 103 aaPredicted RBP7.78□□□□□ -1.16
SS18-203ENST00000415083 LGALS7P47929 136 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 TCF15Q12870 199 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 CDSNQ15517 529 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 MPV17L2Q567V2 206 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 ETFRF1Q6IPR1 90 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 C5orf17Q8NAS9 161 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 SMIM12Q96EX1 92 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 FMC1Q96HJ9 113 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 MC5RP33032 325 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 SUB1P53999 127 aaKnown RBP eCLIP7.78□□□□□ -1.16
SS18-203ENST00000415083 RBX1P62877 108 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 CT83Q5H943 113 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 PPP1R27Q86WC6 154 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 S4R3C0 116 aa7.78□□□□□ -1.16
SS18-203ENST00000415083 TLN1Q9Y490 2541 aaKnown RBP7.78□□□□□ -1.16
SS18-203ENST00000415083 LOC105371242A0A075B767 164 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 A0A096LNJ9 63 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 SNAI2O43623 268 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 LY6HO94772 140 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 TCTAP57738 103 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 UBE2V1Q13404 147 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 KLF17Q5JT82 389 aaPredicted RBP7.77□□□□□ -1.17
SS18-203ENST00000415083 MUC15Q8N387 334 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 ZNF738Q8NE65 137 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 MRPS16Q9Y3D3 137 aaKnown RBP7.77□□□□□ -1.17
SS18-203ENST00000415083 SPTBN2O15020 2390 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 IGHV1-69-2A0A0G2JMI3 117 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 CBY3A6NI87 242 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 NCR2O95944 276 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 SIGLEC15Q6ZMC9 328 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 GOLT1AQ6ZVE7 132 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 OR4C5Q8NGB2 326 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 ORAOV1Q8WV07 137 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 CSN3P07498 182 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 ARMS2P0C7Q2 107 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 LYZP61626 148 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 LOXL1Q08397 574 aaPredicted RBP7.77□□□□□ -1.17
SS18-203ENST00000415083 SRSF12Q8WXF0 261 aaKnown RBP7.77□□□□□ -1.17
SS18-203ENST00000415083 TMEM14CQ9P0S9 112 aa7.77□□□□□ -1.17
SS18-203ENST00000415083 OR4C46A6NHA9 309 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 SYS1-DBNDD2H3BUS1 97 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 HAX1O00165 279 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 NUDT3O95989 172 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 P01737 135 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 RBPMS2Q6ZRY4 209 aaKnown RBP7.76□□□□□ -1.17
SS18-203ENST00000415083 PRNTQ86SH4 94 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 NEU4Q8WWR8 484 aaPredicted RBP7.76□□□□□ -1.17
SS18-203ENST00000415083 CFHR4Q92496 578 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 GFRA4Q9GZZ7 299 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 C1RLQ9NZP8 487 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 COL12A1Q99715 3063 aa7.76□□□□□ -1.17
SS18-203ENST00000415083 TRBV19A0A075B6N1 114 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 M0R3E3 92 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 COX7A1P24310 79 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 RBPJQ06330 500 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 ZNF491Q8N8L2 437 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 C22orf15Q8WYQ4 148 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 NDFIP1Q9BT67 221 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 TMUB1Q9BVT8 246 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 OTORQ9NRC9 128 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 HIGD1AQ9Y241 93 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 H3BRN7 92 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 GATD1Q8NB37 220 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 STXBP6Q8NFX7 210 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 A8MWL6 223 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 IGHG4P01861 327 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 S100A7P31151 101 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 DYNAPQ8N1N2 210 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 TMEM70Q9BUB7 260 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 RALYQ9UKM9 306 aaKnown RBP7.75□□□□□ -1.17
SS18-203ENST00000415083 INSIG2Q9Y5U4 225 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 CELSR2Q9HCU4 2923 aa7.75□□□□□ -1.17
SS18-203ENST00000415083 OR2T8A6NH00 312 aa7.74□□□□□ -1.17
SS18-203ENST00000415083 NDPQ00604 133 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms