RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SHANK3Q9BYB0 1731 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 NDUFB11Q9NX14 153 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 OR5AC2Q9NZP5 309 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 EPRSP07814 1512 aaKnown RBP2.72□□□□□ -1.97
LSM5-205ENST00000409952 LCTP09848 1927 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 NWD1Q149M9 1564 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 MUC21A0A0G2JKD1 596 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 MUC21A0A140T8X8 626 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 A0A1B0GV90 55 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 CCDC160A6NGH7 325 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 TIMM17BO60830 172 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 CTSGP08311 255 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 TRGC1P0CF51 173 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 TMEM14EPQ6UXP3 125 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 OR4S1Q8NGB4 309 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 OR5A2Q8NGI9 324 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 OR4K15Q8NH41 348 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 LINC00167Q96N53 147 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 PKMYT1Q99640 499 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 Q9BRP9 147 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 LINC00467Q9BRT7 94 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 CALML5Q9NZT1 146 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 WDR97A6NE52 1622 aa2.71□□□□□ -1.98
LSM5-205ENST00000409952 SCAF11Q99590 1463 aaKnown RBP2.71□□□□□ -1.98
LSM5-205ENST00000409952 PLXND1Q9Y4D7 1925 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 RGS12O14924 1447 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 MEIKINA0A087WXM9 373 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 LINC00587B1AMM8 73 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 CTSDP07339 412 aaPredicted RBP2.7□□□□□ -1.98
LSM5-205ENST00000409952 ZNF705BP0CI00 300 aaPredicted RBP2.7□□□□□ -1.98
LSM5-205ENST00000409952 CSRP1P21291 193 aaKnown RBP2.7□□□□□ -1.98
LSM5-205ENST00000409952 S100A1P23297 94 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 TMEM258P61165 79 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 NNATQ16517 81 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 ZNF791Q3KP31 576 aaPredicted RBP2.7□□□□□ -1.98
LSM5-205ENST00000409952 GLYATL3Q5SZD4 288 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 C7orf65Q6ZTY9 151 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 OR5H6Q8NGV6 325 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 ZNF418Q8TF45 676 aaPredicted RBP2.7□□□□□ -1.98
LSM5-205ENST00000409952 NAT14Q8WUY8 206 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 MAGOHBQ96A72 148 aaKnown RBP2.7□□□□□ -1.98
LSM5-205ENST00000409952 PRELID3AQ96N28 172 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 MCEEQ96PE7 176 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 SHROOM2Q13796 1616 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 RTL9Q8NET4 1388 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 FANCAO15360 1455 aa2.7□□□□□ -1.98
LSM5-205ENST00000409952 TARBP1Q13395 1621 aaKnown RBP2.69□□□□□ -1.98
LSM5-205ENST00000409952 PRDM2Q13029 1718 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 HMSDA8MTL9 139 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 J3QR89 54 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 APOC1P02654 83 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 MT-ND6P03923 174 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 IGKV3-11P04433 115 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 HINT1P49773 126 aaPredicted RBP2.69□□□□□ -1.98
LSM5-205ENST00000409952 ERHP84090 104 aaKnown RBP2.69□□□□□ -1.98
LSM5-205ENST00000409952 KLRD1Q13241 179 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 TAF9Q16594 264 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 TAS2R4Q9NYW5 299 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 ERG28Q9UKR5 140 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 CACNA1GO43497 2377 aa2.69□□□□□ -1.98
LSM5-205ENST00000409952 OVOS2A0A0J9YW53 1432 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 OVOS2Q6IE36 1432 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 IGLV10-54A0A075B6I4 117 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 TMSB15BA0A087X1C1 80 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 A0A1W2PNU3 283 aaPredicted RBP2.68□□□□□ -1.98
LSM5-205ENST00000409952 IGLV6-57P01721 117 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 PMP2P02689 132 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 TSPAN19P0C672 248 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 CRYGSP22914 178 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 KDELR1P24390 212 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 NCS1P62166 190 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 ZNF345Q14585 488 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 ESRGQ1W209 222 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 IGFL1Q6UW32 110 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 FAM216BQ8N7L0 139 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 OR4B1Q8NGF8 309 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 OR4X2Q8NGF9 303 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 OR8B3Q8NGG8 313 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 OR4C6Q8NH72 309 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 DIRC1Q969H9 104 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 TP53RKQ96S44 253 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 C2orf88Q9BSF0 95 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 TAF9BQ9HBM6 251 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 CCL26Q9Y258 94 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 DSPPQ9NZW4 1301 aa2.68□□□□□ -1.98
LSM5-205ENST00000409952 EP400Q96L91 3159 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 PRR14LQ5THK1 2151 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 DLEU1O43261 78 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 FOXA3P55318 350 aaPredicted RBP2.67□□□□□ -1.98
LSM5-205ENST00000409952 RPS25P62851 125 aaKnown RBP2.67□□□□□ -1.98
LSM5-205ENST00000409952 SELENOWP63302 87 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 SPANXN5Q5MJ07 72 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 ZNF826PQ6ZT77 177 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 MMGT1Q8N4V1 131 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 MORN4Q8NDC4 146 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 CHCHD1Q96BP2 118 aaKnown RBP2.67□□□□□ -1.98
LSM5-205ENST00000409952 LPAR5Q9H1C0 372 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
LSM5-205ENST00000409952 DENND4CQ5VZ89 1909 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms