RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 C5orf17Q8NAS9 161 aa4.9□□□□□ -1.62
GTF3C3-202ENST00000409364 ZNF502Q8TBZ5 544 aa4.9□□□□□ -1.62
GTF3C3-202ENST00000409364 EEF1AKMT3Q96AZ1 226 aa4.9□□□□□ -1.62
GTF3C3-202ENST00000409364 SMIM12Q96EX1 92 aa4.9□□□□□ -1.62
GTF3C3-202ENST00000409364 OTORQ9NRC9 128 aa4.9□□□□□ -1.62
GTF3C3-202ENST00000409364 OSTCQ9NRP0 149 aa4.9□□□□□ -1.62
GTF3C3-202ENST00000409364 AURKAIP1Q9NWT8 199 aaPredicted RBP4.9□□□□□ -1.62
GTF3C3-202ENST00000409364 KLF12Q9Y4X4 402 aa4.9□□□□□ -1.62
GTF3C3-202ENST00000409364 HELZ2Q9BYK8 2649 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 TRBV19A0A075B6N1 114 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 C5orf52A6NGY3 159 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 OR2T8A6NH00 312 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 FAM223BA6NKX1 122 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 LINC01548A6NM66 108 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 G3V318 75 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 H3BUX3 64 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 K7EN84 100 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 BMPR1BO00238 502 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 IGHG2P01859 326 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 TRGC2P03986 189 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 TYMSP04818 313 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 CLEC3BP05452 202 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 PLA2G2AP14555 144 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 RAB9AP51151 201 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 ERVFC1-1P60608 527 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 UBE2G1P62253 170 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 TMEM183BQ1AE95 376 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 LEMD1Q68G75 181 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 BAGE2Q86Y30 109 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 FAM223AQ8IWN6 122 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 MBD6Q96DN6 1003 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 ATG101Q9BSB4 218 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 Q9H3A6 140 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 SAV1Q9H4B6 383 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 S4R3C0 116 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 UTP20O75691 2785 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 A0A1W2PPQ1 181 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 H3BUA1 57 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 J3QKU1 62 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 AP4M1O00189 453 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 RPL7P18124 248 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 HNF1AP20823 631 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 ADMP35318 185 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 KRTAP10-9P60411 292 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 SNRPEP62304 92 aaKnown RBP4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 PDE6HQ13956 83 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 USF2Q15853 346 aaPredicted RBP4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 LY6EQ16553 131 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 SMUG1Q53HV7 270 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 C19orf54Q5BKX5 351 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 C9orf152Q5JTZ5 239 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 CMTM2Q8TAZ6 248 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 FMC1Q96HJ9 113 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 USMG5Q96IX5 58 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 IGF2BP2-AS1Q96M15 143 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 GPR82Q96P67 336 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 CHRDL1Q9BU40 450 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 ZNF586Q9NXT0 402 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 IL36BQ9NZH7 164 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 RABAC1Q9UI14 185 aa4.89□□□□□ -1.63
GTF3C3-202ENST00000409364 TENM4Q6N022 2769 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 USP9YO00507 2555 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 ZNF320A2RRD8 509 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 SH2D7A6NKC9 451 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 K7EQM0 130 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 IGLV2-8P01709 118 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 IGHV3-23P01764 117 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 TCRAP04437 139 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 SNRPCP09234 159 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 IGLC2P0DOY2 106 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 MGST1P10620 155 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 GPR183P32249 361 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 PSG9Q00887 426 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 OR5I1Q13606 314 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 FAM231DQ6ZW35 169 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 OR5R1Q8NH85 324 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 ZNF414Q96IQ9 312 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 LINC00479Q96M42 142 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 MS4A10Q96PG2 267 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 PPP1R14DQ9NXH3 145 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 FASNP49327 2511 aaKnown RBP4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 PTPN13Q12923 2485 aa4.88□□□□□ -1.63
GTF3C3-202ENST00000409364 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.88□□□□□ -1.637e-8■■■■■ 35.8
GTF3C3-202ENST00000409364 NAV2Q8IVL1 2488 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 DOPEY2Q9Y3R5 2298 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 TRAV34A0A0B4J273 112 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 TRBV6-1A0A0K0K1D8 114 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 SERTM2A0A1B0GWG4 89 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 UBE2CO00762 179 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 MRPS12O15235 138 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 HIST1H2BKO60814 126 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 HIST1H2BJP06899 126 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 IGHV4-31P0DP07 118 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 HIST1H2BOP23527 126 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 PPIFP30405 207 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 HIST1H2BBP33778 126 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 HIST1H2BDP58876 126 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 HIST1H2BCP62807 126 aa4.87□□□□□ -1.63
GTF3C3-202ENST00000409364 HIST2H2BEQ16778 126 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms