RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
GABPA-202ENST00000400075 ZNF833PQ6ZTB9 187 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 RFNGQ9Y644 331 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 PSMB2P49721 201 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 HBBP68871 147 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 DOCK11Q5JSL3 2073 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 CENPVL3A0A0U1RRI6 287 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 RNASE2P10153 161 aaKnown RBP11.56□□□□□ -0.56
GABPA-202ENST00000400075 ATP5G3P48201 142 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 COL4A3Q01955 1670 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 MALP21145 153 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 ZNF138P52744 262 aa11.56□□□□□ -0.56
GABPA-202ENST00000400075 TOMM40O96008 361 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 AMBPP02760 352 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 CFAP161Q6P656 301 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 TMEM136Q6ZRR5 245 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 GGTLC1Q9BX51 225 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 TRAV5A0A0B4J249 113 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 NPIPB5A8MRT5 1133 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 IGHV3-53P01767 116 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 HNRNPA3P51991 378 aaKnown RBP11.55□□□□□ -0.56
GABPA-202ENST00000400075 DAD1P61803 113 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 OR4D5Q8NGN0 318 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 C2orf88Q9BSF0 95 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 OR10D4PQ8NGN7 298 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 DYSFO75923 2080 aa11.55□□□□□ -0.56
GABPA-202ENST00000400075 FN1P02751 2386 aaKnown RBP11.55□□□□□ -0.56
GABPA-202ENST00000400075 PPIFP30405 207 aaKnown RBP11.55□□□□□ -0.56
GABPA-202ENST00000400075 RPP21Q9H633 154 aaKnown RBP11.55□□□□□ -0.56
GABPA-202ENST00000400075 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
GABPA-202ENST00000400075 NMSQ5H8A3 153 aa11.54□□□□□ -0.56
GABPA-202ENST00000400075 RPL36AP83881 106 aaKnown RBP11.54□□□□□ -0.56
GABPA-202ENST00000400075 C9orf66Q5T8R8 295 aa11.54□□□□□ -0.56
GABPA-202ENST00000400075 RPL36ALQ969Q0 106 aaKnown RBP11.54□□□□□ -0.56
GABPA-202ENST00000400075 SDHCQ99643 169 aaPredicted RBP11.54□□□□□ -0.56
GABPA-202ENST00000400075 F5H768 121 aa11.54□□□□□ -0.56
GABPA-202ENST00000400075 MDKP21741 143 aaPredicted RBP11.54□□□□□ -0.56
GABPA-202ENST00000400075 COTL1Q14019 142 aa11.54□□□□□ -0.56
GABPA-202ENST00000400075 DPH3P1Q9H4G8 78 aa11.54□□□□□ -0.56
GABPA-202ENST00000400075 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
GABPA-202ENST00000400075 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
GABPA-202ENST00000400075 NMBP08949 121 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 TMEM50AO95807 157 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 SUPT4H1P63272 117 aaKnown RBP11.53□□□□□ -0.56
GABPA-202ENST00000400075 CLPSL1A2RUU4 121 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 CA1P00915 261 aaPredicted RBP11.53□□□□□ -0.56
GABPA-202ENST00000400075 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 ALKBH7Q9BT30 221 aaPredicted RBP11.53□□□□□ -0.56
GABPA-202ENST00000400075 RSPO3Q9BXY4 272 aaPredicted RBP11.53□□□□□ -0.56
GABPA-202ENST00000400075 IGKV1-6A0A0C4DH72 117 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 PRB4P10163 310 aaPredicted RBP11.53□□□□□ -0.56
GABPA-202ENST00000400075 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 PRSS57Q6UWY2 283 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 EXOC3-AS1Q8N2X6 119 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 OR11H6Q8NGC7 330 aa11.53□□□□□ -0.56
GABPA-202ENST00000400075 NDUFA4O00483 81 aa11.52□□□□□ -0.56
GABPA-202ENST00000400075 OR10J3Q5JRS4 329 aa11.52□□□□□ -0.56
GABPA-202ENST00000400075 ST6GALNAC6Q969X2 333 aa11.52□□□□□ -0.56
GABPA-202ENST00000400075 PRELID3AQ96N28 172 aa11.52□□□□□ -0.56
GABPA-202ENST00000400075 C8orf86Q6ZUL3 223 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.52□□□□□ -0.57
GABPA-202ENST00000400075 HINT1P49773 126 aaPredicted RBP11.52□□□□□ -0.57
GABPA-202ENST00000400075 PSG3Q16557 428 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 MLANAQ16655 118 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 CBLN2Q8IUK8 224 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 OR10AG1Q8NH19 301 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 INAFM1C9JVW0 142 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 H3BVH4 76 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 TMEM95Q3KNT9 176 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 LYRM7Q5U5X0 104 aa11.52□□□□□ -0.57
GABPA-202ENST00000400075 LEPROTL1O95214 131 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 FOXA3P55318 350 aaPredicted RBP11.51□□□□□ -0.57
GABPA-202ENST00000400075 BLCAPP62952 87 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 ZNF506Q5JVG8 444 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 ST20Q9HBF5 79 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 DIAPH2-AS1Q14236 149 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 MTORP42345 2549 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 H3BUA1 57 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 LGALS3P17931 250 aaKnown RBP11.51□□□□□ -0.57
GABPA-202ENST00000400075 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
GABPA-202ENST00000400075 A0A1B0GW15 77 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 C15orf65H3BRN8 121 aa11.51□□□□□ -0.57
GABPA-202ENST00000400075 SRIP30626 198 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 YPEL3P61236 119 aaPredicted RBP11.5□□□□□ -0.57
GABPA-202ENST00000400075 CCL20P78556 96 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 TMEM14EPQ6UXP3 125 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 RPLP1P05386 114 aaKnown RBP11.5□□□□□ -0.57
GABPA-202ENST00000400075 IGFL4Q6B9Z1 124 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 C11orf53Q8IXP5 236 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 NMUP48645 174 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 CACNG7P62955 275 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 TMEM170BQ5T4T1 132 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 TMEM190Q8WZ59 177 aa11.5□□□□□ -0.57
GABPA-202ENST00000400075 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
GABPA-202ENST00000400075 DEFB136Q30KP8 78 aa11.49□□□□□ -0.57
GABPA-202ENST00000400075 RNF126Q9BV68 326 aa11.49□□□□□ -0.57
GABPA-202ENST00000400075 NDUFA4L2Q9NRX3 87 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms