RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 NUPR1O60356 82 aa9□□□□□ -0.97
HPS4-202ENST00000398145 TMEM200BQ69YZ2 307 aa9□□□□□ -0.97
HPS4-202ENST00000398145 SLC50A1Q9BRV3 221 aa9□□□□□ -0.97
HPS4-202ENST00000398145 ESDP10768 282 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 HOXA3O43365 443 aaPredicted RBP8.99□□□□□ -0.97
HPS4-202ENST00000398145 FXYD7P58549 80 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 VWC2Q2TAL6 325 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 GTSCR1Q86UQ5 136 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 RNF138Q8WVD3 245 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 SLC25A2Q9BXI2 301 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 ZNF56Q15929 161 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 Q86TA4 180 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 FAM169BQ8N8A8 192 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 ZNF492Q9P255 531 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 FREM1Q5H8C1 2179 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 ARHGAP21Q5T5U3 1957 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 GTF3C1Q12789 2109 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 K7EN84 100 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 SMAD7O15105 426 aaKnown RBP8.99□□□□□ -0.97
HPS4-202ENST00000398145 ARMS2P0C7Q2 107 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 ORMDL2Q53FV1 153 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 LYPD1Q8N2G4 141 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 KIR3DL3Q8N743 410 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 FAM57AQ8TBR7 257 aa8.99□□□□□ -0.97
HPS4-202ENST00000398145 ZNF106Q9H2Y7 1883 aaKnown RBP8.99□□□□□ -0.97
HPS4-202ENST00000398145 TIMM23O14925 209 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 WNT2P09544 360 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 IFI27P40305 119 aaPredicted RBP8.98□□□□□ -0.97
HPS4-202ENST00000398145 PRR20EP86478 221 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 PRR20CP86479 221 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 PRR20DP86480 221 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 PRR20BP86481 221 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 PRR20AP86496 221 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 TDRG1Q3Y452 100 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 PRDM6Q9NQX0 595 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 CD24P25063 80 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 ZC2HC1BQ5TFG8 222 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 GAFA1Q96PS6 74 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 GOLGB1Q14789 3259 aaKnown RBP8.98□□□□□ -0.97
HPS4-202ENST00000398145 MALRD1Q5VYJ5 2156 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 CIRBPQ14011 172 aaKnown RBP8.98□□□□□ -0.97
HPS4-202ENST00000398145 ADIPOQQ15848 244 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 FAM71F2Q6NXP2 309 aa8.98□□□□□ -0.97
HPS4-202ENST00000398145 IGKV2-40A0A087WW87 121 aaPredicted RBP8.97□□□□□ -0.97
HPS4-202ENST00000398145 IGKV2D-40P01614 121 aaPredicted RBP8.97□□□□□ -0.97
HPS4-202ENST00000398145 IGHV1-8P0DP01 117 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 TMPRSS3P57727 454 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 PAX2Q02962 417 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 PSG3Q16557 428 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 FAM106AQ4KMX7 169 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 RNASE6Q93091 150 aaKnown RBP8.97□□□□□ -0.97
HPS4-202ENST00000398145 GTSF1LQ9H1H1 148 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 COL4A4P53420 1690 aaPredicted RBP8.97□□□□□ -0.97
HPS4-202ENST00000398145 ZNF815PA8K554 130 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 TGFAP01135 160 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 KLF17Q5JT82 389 aaPredicted RBP8.97□□□□□ -0.97
HPS4-202ENST00000398145 CLEC19AQ6UXS0 136 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 C15orf65H3BRN8 121 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 EMP1P54849 157 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 LINC01560Q8TB33 94 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 NDUFA4L2Q9NRX3 87 aa8.97□□□□□ -0.97
HPS4-202ENST00000398145 IGHV1-24A0A0C4DH33 117 aa8.96□□□□□ -0.97
HPS4-202ENST00000398145 A0A1W2PPI3 338 aa8.96□□□□□ -0.97
HPS4-202ENST00000398145 Q6ZR03 302 aa8.96□□□□□ -0.97
HPS4-202ENST00000398145 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.97
HPS4-202ENST00000398145 COLQQ9Y215 455 aaPredicted RBP8.96□□□□□ -0.97
HPS4-202ENST00000398145 SIGLEC9Q9Y336 463 aa8.96□□□□□ -0.97
HPS4-202ENST00000398145 EP400Q96L91 3159 aa8.96□□□□□ -0.97
HPS4-202ENST00000398145 TRGV3P03979 118 aa8.96□□□□□ -0.97
HPS4-202ENST00000398145 JMJD8Q96S16 334 aa8.96□□□□□ -0.97
HPS4-202ENST00000398145 FGF23Q9GZV9 251 aaPredicted RBP8.96□□□□□ -0.97
HPS4-202ENST00000398145 C11orf1Q9H5F2 150 aa8.96□□□□□ -0.97
HPS4-202ENST00000398145 CHTOPQ9Y3Y2 248 aaKnown RBP8.96□□□□□ -0.97
HPS4-202ENST00000398145 SH2D1AO60880 128 aa8.96□□□□□ -0.98
HPS4-202ENST00000398145 LAGE3Q14657 143 aa8.96□□□□□ -0.98
HPS4-202ENST00000398145 CYSLTR1Q9Y271 337 aa8.96□□□□□ -0.98
HPS4-202ENST00000398145 TRAV8-2A0A0B4J237 113 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 H3BRM9 83 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 TICRRQ7Z2Z1 1910 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 IGHV1-3A0A0C4DH29 117 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 TMEM178BH3BS89 294 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 COX8AP10176 69 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 MAJINQ3KP22 176 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 RNFT1Q5M7Z0 435 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 ZNRD1Q9P1U0 126 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 LSM4Q9Y4Z0 139 aaKnown RBP8.95□□□□□ -0.98
HPS4-202ENST00000398145 TMEM262E9PQX1 116 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 CEACAM4O75871 244 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 ZNF134P52741 427 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 RNF5Q99942 180 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 NCOR1P1Q9H4R4 102 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 MED13Q9UHV7 2174 aa8.95□□□□□ -0.98
HPS4-202ENST00000398145 A8MWV9 139 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 BVES-AS1Q5T3Y7 98 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 Q6ZVH6 145 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 Q8TAT8 98 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 LYNX1G3V0Z9 82 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 SMKR1H3BMG3 65 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms