RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 C16orf92Q96LL3 132 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 GPR82Q96P67 336 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 TRGV9Q99603 122 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 CCDC32Q9BV29 185 aa12.34□□□□□ -0.43
EXOSC3-202ENST00000396521 A0A0B4J2A0 478 aa12.33□□□□□ -0.44
EXOSC3-202ENST00000396521 LINC00854A0A1B0GVQ3 168 aa12.33□□□□□ -0.44
EXOSC3-202ENST00000396521 CENPXA8MT69 81 aa12.33□□□□□ -0.44
EXOSC3-202ENST00000396521 RAB11AP62491 216 aa12.33□□□□□ -0.44
EXOSC3-202ENST00000396521 SRPXP78539 464 aa12.33□□□□□ -0.44
EXOSC3-202ENST00000396521 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
EXOSC3-202ENST00000396521 SHPKQ9UHJ6 478 aa12.33□□□□□ -0.44
EXOSC3-202ENST00000396521 IGKV1D-37A0A075B6S9 117 aa12.32□□□□□ -0.44
EXOSC3-202ENST00000396521 INSP01308 110 aa12.32□□□□□ -0.44
EXOSC3-202ENST00000396521 AKR1C4P17516 323 aa12.32□□□□□ -0.44
EXOSC3-202ENST00000396521 AMTNQ6UX39 209 aa12.32□□□□□ -0.44
EXOSC3-202ENST00000396521 SDHCQ99643 169 aaPredicted RBP12.32□□□□□ -0.44
EXOSC3-202ENST00000396521 RBKSQ9H477 322 aa12.32□□□□□ -0.44
EXOSC3-202ENST00000396521 HSPG2P98160 4391 aa12.32□□□□□ -0.44
EXOSC3-202ENST00000396521 NAP1L6A6NFF2 107 aa12.31□□□□□ -0.44
EXOSC3-202ENST00000396521 F6UB75 175 aa12.31□□□□□ -0.44
EXOSC3-202ENST00000396521 ATP5G1P05496 136 aa12.31□□□□□ -0.44
EXOSC3-202ENST00000396521 ANXA3P12429 323 aa12.31□□□□□ -0.44
EXOSC3-202ENST00000396521 ATP5G3P48201 142 aa12.31□□□□□ -0.44
EXOSC3-202ENST00000396521 Q8N1X5 172 aa12.31□□□□□ -0.44
EXOSC3-202ENST00000396521 OR1B1Q8NGR6 318 aa12.31□□□□□ -0.44
EXOSC3-202ENST00000396521 CBY3A6NI87 242 aa12.3□□□□□ -0.44
EXOSC3-202ENST00000396521 THAP8Q8NA92 274 aa12.3□□□□□ -0.44
EXOSC3-202ENST00000396521 RSG1Q9BU20 258 aa12.3□□□□□ -0.44
EXOSC3-202ENST00000396521 NACAE9PAV3 2078 aa12.3□□□□□ -0.44
EXOSC3-202ENST00000396521 F5H768 121 aa12.29□□□□□ -0.44
EXOSC3-202ENST00000396521 DEFB130BP0DP73 79 aa12.29□□□□□ -0.44
EXOSC3-202ENST00000396521 DEFB130AP0DP74 79 aa12.29□□□□□ -0.44
EXOSC3-202ENST00000396521 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-202ENST00000396521 RPP30P78346 268 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-202ENST00000396521 TMEM256Q8N2U0 113 aa12.29□□□□□ -0.44
EXOSC3-202ENST00000396521 DUXBA0A1W2PPF3 345 aa12.28□□□□□ -0.44
EXOSC3-202ENST00000396521 ZNF98A6NK75 572 aa12.28□□□□□ -0.44
EXOSC3-202ENST00000396521 NUDT3O95989 172 aa12.28□□□□□ -0.44
EXOSC3-202ENST00000396521 CNN1P51911 297 aaKnown RBP12.28□□□□□ -0.44
EXOSC3-202ENST00000396521 OR2F1Q13607 317 aa12.28□□□□□ -0.44
EXOSC3-202ENST00000396521 TTC32Q5I0X7 151 aa12.28□□□□□ -0.44
EXOSC3-202ENST00000396521 TMED4Q7Z7H5 227 aa12.28□□□□□ -0.44
EXOSC3-202ENST00000396521 OR1S1Q8NH92 325 aa12.28□□□□□ -0.44
EXOSC3-202ENST00000396521 ZNF705GA8MUZ8 300 aaPredicted RBP12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 LYRM1O43325 122 aa12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 CLINT1Q14677 625 aa12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 LYZL2Q7Z4W2 148 aa12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 BPIFCQ8NFQ6 507 aa12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 OR11H7Q8NGC8 314 aa12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 C20orf173Q96LM9 149 aa12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 CIB3Q96Q77 187 aaPredicted RBP12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 SLC25A21Q9BQT8 299 aaPredicted RBP12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 SLC25A32Q9H2D1 315 aa12.27□□□□□ -0.45
EXOSC3-202ENST00000396521 CRXO43186 299 aaPredicted RBP12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 MED6O75586 246 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 UPK1BO75841 260 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 TAS2R60P59551 318 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 ZNF493Q6ZR52 646 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 S100A7AQ86SG5 101 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 ZNF503Q96F45 646 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 TMEM147Q9BVK8 224 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 SLC25A22Q9H936 323 aa12.26□□□□□ -0.45
EXOSC3-202ENST00000396521 IGKV1OR2-108A0A075B7D4 117 aa12.25□□□□□ -0.45
EXOSC3-202ENST00000396521 SLC25A6P12236 298 aa12.25□□□□□ -0.45
EXOSC3-202ENST00000396521 MZT2BQ6NZ67 158 aa12.25□□□□□ -0.45
EXOSC3-202ENST00000396521 Q9H8V8 135 aa12.25□□□□□ -0.45
EXOSC3-202ENST00000396521 SCRT2Q9NQ03 307 aa12.25□□□□□ -0.45
EXOSC3-202ENST00000396521 RNF24Q9Y225 148 aa12.25□□□□□ -0.45
EXOSC3-202ENST00000396521 LINC00588Q9Y4M8 146 aa12.25□□□□□ -0.45
EXOSC3-202ENST00000396521 TIMM8BQ9Y5J9 83 aaPredicted RBP12.25□□□□□ -0.45
EXOSC3-202ENST00000396521 LRP1BQ9NZR2 4599 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 A0A1W2PPQ1 181 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 BOLA2-SMG1P6H3BVE0 249 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 M0R2Z0 102 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 PITX3O75364 302 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 SSX7Q7RTT5 188 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 OR10J6PQ8NGY7 276 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 C16orf74Q96GX8 76 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 LINC01587Q99440 93 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 PPP1R14DQ9NXH3 145 aa12.24□□□□□ -0.45
EXOSC3-202ENST00000396521 PLAC8L1A1L4L8 177 aa12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 ADAP1O75689 374 aa12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 NDUFB6O95139 128 aa12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 RPL7P18124 248 aaKnown RBP12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 ORM2P19652 201 aa12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 DEFA1P59665 94 aa12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 DEFA3P59666 94 aa12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 SPATA12Q7Z6I5 190 aa12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 C17orf77Q96MU5 243 aa12.23□□□□□ -0.45
EXOSC3-202ENST00000396521 VAMP1P23763 118 aa12.22□□□□□ -0.45
EXOSC3-202ENST00000396521 BTCP35070 178 aa12.22□□□□□ -0.45
EXOSC3-202ENST00000396521 ASAH1Q13510 395 aa12.22□□□□□ -0.45
EXOSC3-202ENST00000396521 TMEM144Q7Z5S9 345 aa12.22□□□□□ -0.45
EXOSC3-202ENST00000396521 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
EXOSC3-202ENST00000396521 ENKURQ8TC29 256 aa12.22□□□□□ -0.45
EXOSC3-202ENST00000396521 RNF141Q8WVD5 230 aa12.22□□□□□ -0.45
EXOSC3-202ENST00000396521 PRR13Q9NZ81 148 aa12.22□□□□□ -0.45
EXOSC3-202ENST00000396521 PAIP2BQ9ULR5 123 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms