RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 VKORC1Q9BQB6 163 aa13.8□□□□□ -0.2
TRAF3IP1-202ENST00000391993 OR11H12B2RN74 326 aa13.8□□□□□ -0.2
TRAF3IP1-202ENST00000391993 RPL27AP46776 148 aaKnown RBP13.8□□□□□ -0.2
TRAF3IP1-202ENST00000391993 C3orf36Q3SXR2 165 aa13.8□□□□□ -0.2
TRAF3IP1-202ENST00000391993 OR11H1Q8NG94 326 aa13.8□□□□□ -0.2
TRAF3IP1-202ENST00000391993 OR11H2Q8NH07 326 aa13.8□□□□□ -0.2
TRAF3IP1-202ENST00000391993 C22orf46C9J442 243 aa13.8□□□□□ -0.2
TRAF3IP1-202ENST00000391993 OR5AN1Q8NGI8 311 aa13.8□□□□□ -0.2
TRAF3IP1-202ENST00000391993 LAMA1P25391 3075 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 B3GALT5-AS1P59052 145 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 PRCDQ00LT1 54 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 C2orf16Q68DN1 1984 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 TCRAP04437 139 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 FXYD2P54710 66 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 BRWD1-AS2P59051 145 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 ATP1A1-AS1Q5TC04 95 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 RASL11AQ6T310 242 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 RPUSD1Q9UJJ7 312 aaKnown RBP13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 IGKV1OR2-108A0A075B7D4 117 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 LYZL1Q6UWQ5 148 aa13.79□□□□□ -0.2
TRAF3IP1-202ENST00000391993 NPIPB5A8MRT5 1133 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 DAZAP2Q15038 168 aaPredicted RBP13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 ZNF747Q9BV97 191 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 PROCRQ9UNN8 238 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 SIT1Q9Y3P8 196 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 PRR20EP86478 221 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 PRR20CP86479 221 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 PRR20DP86480 221 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 PRR20BP86481 221 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 PRR20AP86496 221 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 IGFL4Q6B9Z1 124 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 ERVK11-1P61568 191 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 TMEM178AQ8NBL3 297 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 VGLL1Q99990 258 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 SPG11Q96JI7 2443 aa13.78□□□□□ -0.2
TRAF3IP1-202ENST00000391993 TRAV8-2A0A0B4J237 113 aa13.77□□□□□ -0.2
TRAF3IP1-202ENST00000391993 B5MCH6 92 aa13.77□□□□□ -0.2
TRAF3IP1-202ENST00000391993 F2RL2O00254 374 aa13.77□□□□□ -0.2
TRAF3IP1-202ENST00000391993 IGHV3-23P01764 117 aa13.77□□□□□ -0.2
TRAF3IP1-202ENST00000391993 FAM106CPP0CH98 169 aa13.77□□□□□ -0.2
TRAF3IP1-202ENST00000391993 FAM106AQ4KMX7 169 aa13.77□□□□□ -0.2
TRAF3IP1-202ENST00000391993 SP5Q6BEB4 398 aaPredicted RBP13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 FMC1Q96HJ9 113 aa13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 SLC25A2Q9BXI2 301 aa13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 LINC00470Q9BZP3 86 aa13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 TCRBV4S1A1TA0A5B7 111 aa13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 CECR9P0C854 216 aa13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 MC5RP33032 325 aa13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 SPANXN1Q5VSR9 72 aa13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 RNF7Q9UBF6 113 aa13.77□□□□□ -0.21
TRAF3IP1-202ENST00000391993 PSMB11A5LHX3 300 aa13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 MGPP08493 103 aa13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 TEX29Q8N6K0 151 aa13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 IGHV3-49A0A0A0MS15 119 aa13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 DUX4L9Q6RFH8 374 aaPredicted RBP13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 Q8TCH9 128 aa13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 SCNM1Q9BWG6 230 aa13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 SOX21Q9Y651 276 aaPredicted RBP13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 PIEZO2Q9H5I5 2752 aa13.76□□□□□ -0.21
TRAF3IP1-202ENST00000391993 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 RPRMLQ8N4K4 120 aa13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 Q8TAT8 98 aa13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 TRAV40A0A0B4J280 105 aa13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 GTSF1Q8WW33 167 aa13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 PSG8Q9UQ74 426 aa13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 LAMTOR5O43504 91 aa13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 SP9P0CG40 484 aa13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 RNASE2P10153 161 aaKnown RBP13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 PGPEP1Q9NXJ5 209 aa13.75□□□□□ -0.21
TRAF3IP1-202ENST00000391993 NKX2-8O15522 239 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 IGHV1-2P23083 117 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 NDUFB3O43676 98 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 IGKCP01834 107 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 INSIG2Q9Y5U4 225 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 IGHV3-66A0A0C4DH42 116 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 F5H697 171 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 LTAP01374 205 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 IGLV2-8P01709 118 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 FOXA2Q9Y261 457 aaPredicted RBP13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 LINC00322Q6ZN03 302 aaPredicted RBP13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 C17orf82Q86X59 251 aaPredicted RBP13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 CACNG8Q8WXS5 425 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 ZNF503Q96F45 646 aa13.74□□□□□ -0.21
TRAF3IP1-202ENST00000391993 SRRM4A7MD48 611 aaKnown RBP13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 UTF1Q5T230 341 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 SIGLEC8Q9NYZ4 499 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 VSTM5A8MXK1 200 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 SNCGO76070 127 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 EMP1P54849 157 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 OR4C13Q8NGP0 309 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 TRBV20-1A0A075B6N2 111 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 KLF5Q13887 457 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 FER1L6-AS2Q96M78 137 aa13.73□□□□□ -0.21
TRAF3IP1-202ENST00000391993 IQCF6A8MYZ5 107 aa13.72□□□□□ -0.21
TRAF3IP1-202ENST00000391993 C21orf140B9A014 251 aa13.72□□□□□ -0.21
TRAF3IP1-202ENST00000391993 DLX1P56177 255 aa13.72□□□□□ -0.21
TRAF3IP1-202ENST00000391993 DPM2O94777 84 aa13.72□□□□□ -0.21
TRAF3IP1-202ENST00000391993 PRSS2P07478 247 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms