RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 LINC00869P0C866 280 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 HLA-EP13747 358 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 CRYBB3P26998 211 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 SRIP30626 198 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 CCL20P78556 96 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 WHAMMP3Q1A5X7 153 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 LGALS9BQ3B8N2 356 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 MRPL51Q4U2R6 128 aaKnown RBP4.25□□□□□ -1.73
TRAV35-201ENST00000390462 LGALS9CQ6DKI2 356 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 SLC25A34Q6PIV7 304 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 HRCT1Q6UXD1 115 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 LCA10Q71F78 164 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 CROCCP2Q86T23 111 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 C11orf42Q8N5U0 333 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 MIR7-3HGQ8N6C7 128 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 ZFAND2AQ8N6M9 145 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 ZNF433Q8N7K0 673 aaPredicted RBP4.25□□□□□ -1.73
TRAV35-201ENST00000390462 TMEM229BQ8NBD8 167 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 RBPMSQ93062 196 aaKnown RBP4.25□□□□□ -1.73
TRAV35-201ENST00000390462 SPENQ96T58 3664 aaKnown RBP4.25□□□□□ -1.73
TRAV35-201ENST00000390462 NDFIP1Q9BT67 221 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 RTL8AQ9BWD3 113 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 RNF122Q9H9V4 155 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 POPDC3Q9HBV1 291 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 TNFRSF19Q9NS68 423 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 MDFICQ9P1T7 246 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 TRAPPC2LQ9UL33 140 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 LINC00588Q9Y4M8 146 aa4.25□□□□□ -1.73
TRAV35-201ENST00000390462 POLQO75417 2590 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 DNHD1Q96M86 4753 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 A0A087WUU8 490 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 UBE2L6O14933 153 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 ZNF73O43830 326 aaPredicted RBP4.24□□□□□ -1.73
TRAV35-201ENST00000390462 IGKV1D-33P01593 117 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 IGKV1-33P01594 117 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 ZNF883P0CG24 379 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 BCL2P10415 239 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 NPPCP23582 126 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 RPL30P62888 115 aaKnown RBP4.24□□□□□ -1.73
TRAV35-201ENST00000390462 OR8G1Q15617 311 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 MORN2Q502X0 79 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 RPL22L1Q6P5R6 122 aaKnown RBP4.24□□□□□ -1.73
TRAV35-201ENST00000390462 Q6ZTC4 211 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 DEFB119Q8N690 84 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 ISOC1Q96CN7 298 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 CXCL16Q9H2A7 254 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 CACYBPQ9HB71 228 aaKnown RBP4.24□□□□□ -1.73
TRAV35-201ENST00000390462 CENPEQ02224 2701 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 TCHHQ07283 1943 aa4.24□□□□□ -1.73
TRAV35-201ENST00000390462 SETD2Q9BYW2 2564 aaPredicted RBP4.23□□□□□ -1.73
TRAV35-201ENST00000390462 A0A096LNJ9 63 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 TRDV1A0A1B0GX56 115 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 A6NED7 52 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 CCDC160A6NGH7 325 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 H7BYZ3 331 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 DLEU1O43261 78 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 TPST1O60507 370 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 CASP1P29466 404 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 S100A11P31949 105 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 CD200P41217 278 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 EVX1P49640 407 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 ARPP19P56211 112 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 DEFB116Q30KQ4 102 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 AADACL3Q5VUY0 350 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 CARD19Q96LW7 228 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 OR2H1Q9GZK4 316 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 LINC00574Q9H8X3 128 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 SNX12Q9UMY4 172 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 FUT9Q9Y231 359 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 U3KQ87 197 aa4.23□□□□□ -1.73
TRAV35-201ENST00000390462 IGKV3D-15A0A087WSY6 115 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 A0A096LPI6 279 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 PINLYPA6NC86 204 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 OVOL1O14753 267 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 IGKV3-20P01619 116 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 PRM2P04554 102 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 CMPK1P30085 196 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 CSN1S1P47710 185 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 ZNF80P51504 273 aaPredicted RBP4.22□□□□□ -1.73
TRAV35-201ENST00000390462 TSPEAR-AS2P59090 65 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 RRN3P1Q2M238 152 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 C10orf91Q5T1B1 145 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 SPATA12Q7Z6I5 190 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 OR8I2Q8N0Y5 310 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 OR51T1Q8NGJ9 327 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 OR5C1Q8NGR4 320 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 RPS4Y2Q8TD47 263 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 HIST1H2BAQ96A08 127 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 GPX7Q96SL4 187 aaPredicted RBP4.22□□□□□ -1.73
TRAV35-201ENST00000390462 AICDAQ9GZX7 198 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 IL36BQ9NZH7 164 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 FBN3Q75N90 2809 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 F8P00451 2351 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 GTF3C1Q12789 2109 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 NUMA1Q14980 2115 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 PLXNA2O75051 1894 aa4.22□□□□□ -1.73
TRAV35-201ENST00000390462 C9JAW5 83 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms