RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 TIMM23BQ5SRD1 257 aa9.86□□□□□ -0.83
SF1-204ENST00000377390 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
SF1-204ENST00000377390 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
SF1-204ENST00000377390 VSTM2AQ8TAG5 236 aa9.86□□□□□ -0.83
SF1-204ENST00000377390 RPP21Q9H633 154 aaKnown RBP9.86□□□□□ -0.83
SF1-204ENST00000377390 MTORP42345 2549 aa9.86□□□□□ -0.83
SF1-204ENST00000377390 GOLT1AQ6ZVE7 132 aa9.86□□□□□ -0.83
SF1-204ENST00000377390 SH2D6Q7Z4S9 175 aa9.86□□□□□ -0.83
SF1-204ENST00000377390 ATP6V0BQ99437 205 aa9.86□□□□□ -0.83
SF1-204ENST00000377390 KIR2DS2P43631 304 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 SAMD5Q5TGI4 173 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 C1orf229Q6ZS94 237 aaPredicted RBP9.85□□□□□ -0.83
SF1-204ENST00000377390 OR10X1Q8NGY0 326 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 GPR82Q96P67 336 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 ZNF257Q9Y2Q1 563 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 C9orf118A6NHY6 69 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 SAA1P0DJI8 122 aaPredicted RBP9.85□□□□□ -0.83
SF1-204ENST00000377390 CRYBA4P53673 196 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 ADAMTSL5Q6ZMM2 481 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 C11orf53Q8IXP5 236 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 ITLN1Q8WWA0 313 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 IGFBPL1Q8WX77 278 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 NHP2Q9NX24 153 aaKnown RBP9.85□□□□□ -0.83
SF1-204ENST00000377390 EPDR1Q9UM22 224 aa9.85□□□□□ -0.83
SF1-204ENST00000377390 IGKV1D-17A0A075B6S4 117 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 SRRM4A7MD48 611 aaKnown RBP9.84□□□□□ -0.83
SF1-204ENST00000377390 C15orf65H3BRN8 121 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 CD69Q07108 199 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 AMTNQ6UX39 209 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 STXBP6Q8NFX7 210 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 CECR9P0C854 216 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 PPIFP30405 207 aaKnown RBP9.84□□□□□ -0.83
SF1-204ENST00000377390 ATP5G2Q06055 141 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 OR1L8Q8NGR8 309 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 CCL17Q92583 94 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 SCNM1Q9BWG6 230 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 TTTY13Q9BZ97 58 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 K7EP34 96 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 SUB1P53999 127 aaKnown RBP eCLIP9.84□□□□□ -0.83
SF1-204ENST00000377390 CACNG7P62955 275 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 COL4A2P08572 1712 aa9.84□□□□□ -0.83
SF1-204ENST00000377390 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 C10orf142B7Z368 130 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 RBP4P02753 201 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 SEC11AP67812 179 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 FAM216BQ8N7L0 139 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 ABHD17AQ96GS6 310 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 VWC2LB2RUY7 222 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 SLC25A17O43808 307 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 LY6HO94772 140 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 TMPRSS3P57727 454 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 ZNF329Q86UD4 541 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 SLC25A2Q9BXI2 301 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 NPFFR1Q9GZQ6 430 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 SCRT2Q9NQ03 307 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 PRSS46E5RG02 174 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 UPK2O00526 184 aa9.83□□□□□ -0.84
SF1-204ENST00000377390 EIF4EBP1Q13541 118 aaPredicted RBP9.83□□□□□ -0.84
SF1-204ENST00000377390 RBPMS2Q6ZRY4 209 aaKnown RBP9.83□□□□□ -0.84
SF1-204ENST00000377390 ZNF462Q96JM2 2506 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 UTP20O75691 2785 aaKnown RBP9.82□□□□□ -0.84
SF1-204ENST00000377390 LYNX1G3V0Z9 82 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.82□□□□□ -0.84
SF1-204ENST00000377390 LYNX1P0DP58 116 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 PRCDQ00LT1 54 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 PLGLAQ15195 96 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 FAM169BQ8N8A8 192 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 IGF2BP2-AS1Q96M15 143 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 PROCRQ9UNN8 238 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 ACANP16112 2415 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 DLL1O00548 723 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 SMIM13P0DJ93 91 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 INO80CQ6PI98 192 aaPredicted RBP9.82□□□□□ -0.84
SF1-204ENST00000377390 GFRALQ6UXV0 394 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 LINC00322Q6ZN03 302 aaPredicted RBP9.82□□□□□ -0.84
SF1-204ENST00000377390 PCP2Q8IVA1 136 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 EXOC3-AS1Q8N2X6 119 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 TMEM14BQ9NUH8 114 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 FOXA2Q9Y261 457 aaPredicted RBP9.82□□□□□ -0.84
SF1-204ENST00000377390 JMJD1CQ15652 2540 aa9.82□□□□□ -0.84
SF1-204ENST00000377390 C21orf140B9A014 251 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 SS18L1O75177 396 aaPredicted RBP9.81□□□□□ -0.84
SF1-204ENST00000377390 NCR2O95944 276 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 PRSS1P07477 247 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 CT45A6P0DMU7 189 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 CT45A5P0DMU8 189 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 CT45A7P0DMV0 189 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 WFDC2Q14508 124 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 PET117Q6UWS5 81 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 SVIPQ8NHG7 77 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 ARPC1AQ92747 370 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 C1RLQ9NZP8 487 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 TRAV17A0A0B4J275 112 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 FCGR2BP31994 310 aaPredicted RBP9.81□□□□□ -0.84
SF1-204ENST00000377390 ANXA2RQ3ZCQ2 193 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 SPRNQ5BIV9 151 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 GCSAMQ8N6F7 178 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 C19orf24Q9BVV8 132 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 MRPL32Q9BYC8 188 aaKnown RBP9.81□□□□□ -0.84
SF1-204ENST00000377390 GEMIN7Q9H840 131 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms