RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 FANCD2OSQ96PS1 177 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 ZFC3H1O60293 1989 aaKnown RBP5.37□□□□□ -1.55
UBR4-204ENST00000375254 BUB3O43684 328 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 C5orf24Q7Z6I8 188 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 TMEM167AQ8TBQ9 72 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 CFHR2P36980 270 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 DOCK7Q96N67 2140 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 FREM3P0C091 2139 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 GPHA2Q96T91 129 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 OPRPNQ99935 248 aaPredicted RBP5.37□□□□□ -1.55
UBR4-204ENST00000375254 SELENOKQ9Y6D0 94 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 CCL5P13501 91 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 ICOSQ9Y6W8 199 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 SCN1AP35498 2009 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 H3BTX0 84 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 IGLC6P0CF74 106 aa5.37□□□□□ -1.55
UBR4-204ENST00000375254 MCRIP2Q9BUT9 160 aaKnown RBP5.37□□□□□ -1.55
UBR4-204ENST00000375254 USMG5Q96IX5 58 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 FAM60AQ9NP50 221 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 A0A0A6YYD4 124 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 NDUFA11Q86Y39 141 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 MDC1Q14676 2089 aaKnown RBP5.36□□□□□ -1.55
UBR4-204ENST00000375254 OOSP1A8MZH6 123 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 TRBV12-3P01733 135 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 NEU4Q8WWR8 484 aaPredicted RBP5.36□□□□□ -1.55
UBR4-204ENST00000375254 HRKO00198 91 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
UBR4-204ENST00000375254 TMEM14BQ9NUH8 114 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 TMEM133Q9H2Q1 129 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 MYH14Q7Z406 1995 aaKnown RBP5.36□□□□□ -1.55
UBR4-204ENST00000375254 LYPD3O95274 346 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 MYH7P12883 1935 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 A0A1B0GUS0 222 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 ECSCRQ19T08 205 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 RSPO2Q6UXX9 243 aaPredicted RBP5.36□□□□□ -1.55
UBR4-204ENST00000375254 PROP1O75360 226 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 PSG7Q13046 419 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 MRPL51Q4U2R6 128 aaKnown RBP5.36□□□□□ -1.55
UBR4-204ENST00000375254 SIT1Q9Y3P8 196 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 QRICH2Q9H0J4 1663 aa5.36□□□□□ -1.55
UBR4-204ENST00000375254 IGHV1OR21-1A0A087WYE8 117 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 SS18Q15532 418 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 SPINK14Q6IE38 97 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 IGLV3-32A0A0A0MS00 114 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 INS-IGF2F8WCM5 200 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 INSP01308 110 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 Q6ZRM9 215 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 CSDC2Q9Y534 153 aaKnown RBP5.35□□□□□ -1.55
UBR4-204ENST00000375254 LENEPQ9Y5L5 61 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 TTC3P53804 2025 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 IGKV1D-8A0A087WSZ0 117 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 WIPF3A6NGB9 483 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 CDC42BPBQ9Y5S2 1711 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 RBAKDNA6NC62 111 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 PAX9P55771 341 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 DAND5Q8N907 189 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 TMEM200BQ69YZ2 307 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 NREPQ16612 68 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 C1orf210Q8IVY1 113 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 LRRIQ1Q96JM4 1722 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 BAALCQ8WXS3 180 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 ZNRF1Q8ND25 227 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 DPH3Q96FX2 82 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 UBE2E2Q96LR5 201 aa5.35□□□□□ -1.55
UBR4-204ENST00000375254 FXYD2P54710 66 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 CFHR4Q92496 578 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 CACNA1FO60840 1977 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 ARMS2P0C7Q2 107 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 SMIM2Q9BVW6 85 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 TRGV2A0A075B6R0 118 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 TRBV30A0A0K0K1B3 111 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 SPTSSBQ8NFR3 76 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 WNK1Q9H4A3 2382 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 FOXF2Q12947 444 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 SLC25A29Q8N8R3 303 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 RCHY1Q96PM5 261 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 TRBV6-1A0A0K0K1D8 114 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 CXCL10P02778 98 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 FDCSPQ8NFU4 85 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.34□□□□□ -1.55
UBR4-204ENST00000375254 NXPH4O95158 308 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 PFN2P35080 140 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 PAX8Q06710 450 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 EXOC3-AS1Q8N2X6 119 aa5.34□□□□□ -1.55
UBR4-204ENST00000375254 CHD5Q8TDI0 1954 aa5.34□□□□□ -1.56
UBR4-204ENST00000375254 C14orf178Q8N769 122 aaPredicted RBP5.34□□□□□ -1.56
UBR4-204ENST00000375254 MYOM1P52179 1685 aa5.34□□□□□ -1.56
UBR4-204ENST00000375254 LYZL4Q96KX0 146 aa5.34□□□□□ -1.56
UBR4-204ENST00000375254 TRBV19A0A075B6N1 114 aa5.34□□□□□ -1.56
UBR4-204ENST00000375254 MYH3P11055 1940 aa5.34□□□□□ -1.56
UBR4-204ENST00000375254 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 ZNF726P1Q15940 193 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 NBR2O15453 112 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 FAM19A5Q7Z5A7 132 aaPredicted RBP5.33□□□□□ -1.56
UBR4-204ENST00000375254 NUPR1O60356 82 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 IGKV3-7A0A075B6H7 116 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 SLC25A45Q8N413 288 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 B9A039 149 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms