RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 PLEKHB2Q96CS7 222 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 NPFFR1Q9GZQ6 430 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 RBMY1BA6NDE4 496 aaKnown RBP17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 RBMY1EA6NEQ0 496 aaKnown RBP17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 TGFAP01135 160 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 RBMY1DP0C7P1 496 aaKnown RBP17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 RBMY1A1P0DJD3 496 aaKnown RBP17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 RBMY1CP0DJD4 496 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 COA6Q5JTJ3 125 aaKnown RBP17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 PEMTQ9UBM1 199 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 RTTNQ86VV8 2226 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 C15orf32Q32M92 178 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 TMEM75Q8N9X5 138 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 M0R1W7 72 aa17.21■□□□□ 0.34
TGFBR1-202ENST00000374994 LINC00477Q96M19 166 aa17.21■□□□□ 0.34
TGFBR1-202ENST00000374994 SCN5AQ14524 2016 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 ASXL3Q9C0F0 2248 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 PAX2Q02962 417 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 ZNF672Q499Z4 452 aaPredicted RBP17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 BUB1B-PAK6H3BSN5 160 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 ZC2HC1BQ5TFG8 222 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 CD24P25063 80 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 TP53BP1Q12888 1972 aaPredicted RBP17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 IGKV1-16P04430 117 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 HAPLN4Q86UW8 402 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 C7orf69Q9H7B7 122 aa17.2■□□□□ 0.34
TGFBR1-202ENST00000374994 TRAV2A0A0B4J234 112 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 NDUFA4L2Q9NRX3 87 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 TRAV41A0A0B4J266 112 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 GATA4P43694 442 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 DLX4Q92988 240 aaPredicted RBP17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 TRAV8-1A0A0A6YYK1 113 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 TRAV8-4A0A0B4J246 113 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 SMIM27A0A1W2PRY6 76 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 TEX43Q6ZNM6 134 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 LINC01587Q99440 93 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 MPDZO75970 2070 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 TDGF1P13385 188 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 WISP1O95388 367 aa17.19■□□□□ 0.34
TGFBR1-202ENST00000374994 LINC00479Q96M42 142 aa17.18■□□□□ 0.34
TGFBR1-202ENST00000374994 TRBV7-9A0A0J9YWB2 115 aa17.18■□□□□ 0.34
TGFBR1-202ENST00000374994 GHRHP01286 108 aa17.18■□□□□ 0.34
TGFBR1-202ENST00000374994 CD28P10747 220 aa17.18■□□□□ 0.34
TGFBR1-202ENST00000374994 RPL15P61313 204 aaKnown RBP17.18■□□□□ 0.34
TGFBR1-202ENST00000374994 CHAC1Q9BUX1 264 aa17.18■□□□□ 0.34
TGFBR1-202ENST00000374994 A0A1B0GUS0 222 aa17.18■□□□□ 0.34
TGFBR1-202ENST00000374994 LHFPL4Q7Z7J7 247 aa17.18■□□□□ 0.34
TGFBR1-202ENST00000374994 LYNX1G3V0Z9 82 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 LYNX1P0DP58 116 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 SFTA2Q6UW10 78 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 CYYR1Q96J86 154 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 TMEM158Q8WZ71 300 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 PYGO2Q9BRQ0 406 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 PROK2Q9HC23 129 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 PTPRDP23468 1912 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 IGKV3OR2-268A0A0C4DH90 116 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 A0A1W2PPI3 338 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 AMN1Q8IY45 258 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 Q8TCH9 128 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 VCYO14598 125 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 MLANAQ16655 118 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 C3orf36Q3SXR2 165 aa17.17■□□□□ 0.34
TGFBR1-202ENST00000374994 TRBV7-1A0A0A6YYK4 115 aa17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 ATXN8Q156A1 80 aa17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 RNF166Q96A37 237 aaPredicted RBP17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 NAA38Q9BRA0 125 aaKnown RBP17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 RNASE1P07998 156 aaKnown RBP17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 PRB3Q04118 309 aaPredicted RBP17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 NLRC5Q86WI3 1866 aa17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 IGHV4-39P01824 125 aa17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 ARMS2P0C7Q2 107 aa17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 MED12Q93074 2177 aa17.16■□□□□ 0.34
TGFBR1-202ENST00000374994 VMO1Q7Z5L0 202 aa17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 GGTLC3B5MD39 225 aa17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 GAGE2BQ13066 116 aa17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 GAGE2EQ4V326 116 aa17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 GAGE2DQ9UEU5 116 aa17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 PRSS46E5RG02 174 aa17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 GLMPQ8WWB7 406 aa17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 OCIAD2Q56VL3 154 aa17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 ITLN2Q8WWU7 325 aaPredicted RBP17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 MORN3Q6PF18 240 aaPredicted RBP17.15■□□□□ 0.34
TGFBR1-202ENST00000374994 FAM104BQ5XKR9 115 aa17.14■□□□□ 0.34
TGFBR1-202ENST00000374994 CEP250Q9BV73 2442 aa17.14■□□□□ 0.33
TGFBR1-202ENST00000374994 CFHR2P36980 270 aa17.14■□□□□ 0.33
TGFBR1-202ENST00000374994 LYPD6Q86Y78 171 aa17.14■□□□□ 0.33
TGFBR1-202ENST00000374994 ESPL1Q14674 2120 aa17.14■□□□□ 0.33
TGFBR1-202ENST00000374994 TCF20Q9UGU0 1960 aaKnown RBP17.14■□□□□ 0.33
TGFBR1-202ENST00000374994 NDUFS8O00217 210 aa17.14■□□□□ 0.33
TGFBR1-202ENST00000374994 ZNF562Q6V9R5 426 aa17.14■□□□□ 0.33
TGFBR1-202ENST00000374994 SNRNP200O75643 2136 aaKnown RBP17.14■□□□□ 0.33
TGFBR1-202ENST00000374994 ZFAND6Q6FIF0 208 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 TRIOBPQ9H2D6 2365 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 ZNF833PQ6ZTB9 187 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 HAX1O00165 279 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 CST9LQ9H4G1 147 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 TMEM14CQ9P0S9 112 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 GVINP1Q7Z2Y8 2422 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 M0R2P5 195 aa17.13■□□□□ 0.33
TGFBR1-202ENST00000374994 Q6ZSR3 168 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms