RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TOMM40O96008 361 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 SLAQ13239 276 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 TMEM219Q86XT9 240 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 MBD6Q96DN6 1003 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 C21orf62Q9NYP8 219 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 IZUMO1RA6ND01 250 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 NPIPB5A8MRT5 1133 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 H3BRN7 92 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 AMY1AP04745 511 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 FAM106CPP0CH98 169 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 SRIP30626 198 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 UBE2E1P51965 193 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 MFAP4P55083 255 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 GDF5OSQ5U4N7 250 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 BPIFA4PQ86YQ2 179 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 KLF12Q9Y4X4 402 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 ZNF462Q96JM2 2506 aa12.53□□□□□ -0.4
CNKSR1-202ENST00000374253 SCGB1D1O95968 90 aa12.52□□□□□ -0.4
CNKSR1-202ENST00000374253 BRD3OSQ6XYD6 125 aa12.52□□□□□ -0.4
CNKSR1-202ENST00000374253 TTC9CQ8N5M4 171 aa12.52□□□□□ -0.4
CNKSR1-202ENST00000374253 TMEM68Q96MH6 324 aa12.52□□□□□ -0.4
CNKSR1-202ENST00000374253 RCHY1Q96PM5 261 aa12.52□□□□□ -0.4
CNKSR1-202ENST00000374253 CHRDL1Q9BU40 450 aa12.52□□□□□ -0.4
CNKSR1-202ENST00000374253 ZNF331Q9NQX6 463 aaPredicted RBP12.52□□□□□ -0.4
CNKSR1-202ENST00000374253 G3V318 75 aa12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 BMPR1BO00238 502 aa12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 HLA-DRB1P01911 266 aa12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 GRAMD2BQ96HH9 432 aa12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 MS4A10Q96PG2 267 aa12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 MLST8Q9BVC4 326 aa12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 OTORQ9NRC9 128 aa12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 FBXL7Q9UJT9 491 aa12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 USP9YO00507 2555 aaPredicted RBP12.52□□□□□ -0.41
CNKSR1-202ENST00000374253 CSPG4Q6UVK1 2322 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 TRBV19A0A075B6N1 114 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 LTAP01374 205 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 EBI3Q14213 229 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 OR4F17Q8NGA8 305 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 LINC00527Q9UJ94 153 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 SOX21Q9Y651 276 aaPredicted RBP12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 ZANQ9Y493 2812 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 OVOL3O00110 214 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 ATP6V0E1O15342 81 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 IGFL4Q6B9Z1 124 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 UNQ5815/PRO19632Q6UWF5 114 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 FMC1Q96HJ9 113 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 TMEM14CQ9P0S9 112 aa12.51□□□□□ -0.41
CNKSR1-202ENST00000374253 IGHV4-61A0A0C4DH41 118 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 CENPVL3A0A0U1RRI6 287 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 OOSP1A8MZH6 123 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 IGLV2-11P01706 119 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 IGLC2P0DOY2 106 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 Q86TA4 180 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 NRGNQ92686 78 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 NPFFO15130 113 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 APCSP02743 223 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 FAM209BQ5JX69 171 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 SIGLEC15Q6ZMC9 328 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 ZNF664Q8N3J9 261 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 OR5R1Q8NH85 324 aa12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 NOL4LQ96MY1 436 aaPredicted RBP12.5□□□□□ -0.41
CNKSR1-202ENST00000374253 TRBV9A0A0B4J1U6 114 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 P01737 135 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 GPR183P32249 361 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 Q6ZWC4 215 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 TSKUQ8WUA8 353 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 GTSF1Q8WW33 167 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 SAMD10Q9BYL1 202 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 TBL2Q9Y4P3 447 aaKnown RBP12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 ZNF253O75346 499 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 CTSGP08311 255 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 RPL19P84098 196 aaKnown RBP12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 C15orf32Q32M92 178 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 ZNF414Q96IQ9 312 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 CCL19Q99731 98 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 RNF114Q9Y508 228 aa12.49□□□□□ -0.41
CNKSR1-202ENST00000374253 MRPS12O15235 138 aaKnown RBP12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 PRB1P04280 392 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 IGHV3OR16-13A0A075B7E8 117 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 IGHV3-74A0A0B4J1X5 117 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 HLA-DQA1P01909 254 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 MT-ND6P03923 174 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 PMCHP20382 165 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 BRS3P32247 399 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 C1RLQ9NZP8 487 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 THYN1Q9P016 225 aa12.48□□□□□ -0.41
CNKSR1-202ENST00000374253 TRAV40A0A0B4J280 105 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 COL8A1P27658 744 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 SSTP61278 116 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms