RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SUB1P53999 127 aaKnown RBP eCLIP2.74□□□□□ -1.97
MCF2-202ENST00000370573 RAB11AP62491 216 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 DEFA5Q01523 94 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 GAGE1Q13065 139 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 EXOSC2Q13868 293 aaKnown RBP2.74□□□□□ -1.97
MCF2-202ENST00000370573 ATP6V1FQ16864 119 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 ECSCRQ19T08 205 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 KLK9Q2XQG4 91 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 AKIRIN2Q53H80 203 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 RBMS3Q6XE24 437 aaKnown RBP2.74□□□□□ -1.97
MCF2-202ENST00000370573 SLC35E3Q7Z769 313 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 SVBPQ8N300 66 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 UBAC2Q8NBM4 344 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 STOML3Q8TAV4 291 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 RNASEH2CQ8TDP1 164 aaKnown RBP2.74□□□□□ -1.97
MCF2-202ENST00000370573 NARS2Q96I59 477 aaKnown RBP2.74□□□□□ -1.97
MCF2-202ENST00000370573 ATP5SQ99766 215 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 ZNF471Q9BX82 626 aaPredicted RBP2.74□□□□□ -1.97
MCF2-202ENST00000370573 CSTL1Q9H114 145 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 KLK9Q9UKQ9 250 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 IGKV1OR2-108A0A075B7D4 117 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 TRAV41A0A0B4J266 112 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 IGHV4-28A0A0C4DH34 117 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 GAGE12JA6NER3 117 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 CLDN34H7C241 214 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 K7EIM0 57 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 CRLF1O75462 422 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 MT-CO2P00403 227 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 GPX4P36969 197 aaPredicted RBP2.74□□□□□ -1.97
MCF2-202ENST00000370573 HBG1P69891 147 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 HBG2P69892 147 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 RUNX1Q01196 453 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 C10orf99Q6UWK7 81 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 SLC16A13Q7RTY0 426 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 BAP18Q8IXM2 172 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 Q8N2B8 174 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 SCARB1Q8WTV0 552 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 PINX1Q96BK5 328 aaKnown RBP2.74□□□□□ -1.97
MCF2-202ENST00000370573 GINS3Q9BRX5 216 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 TMEM147Q9BVK8 224 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 GGACTQ9BVM4 153 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 NKX6-2Q9C056 277 aaPredicted RBP2.74□□□□□ -1.97
MCF2-202ENST00000370573 PRSS22Q9GZN4 317 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 SH3BGRL3Q9H299 93 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 NIT2Q9NQR4 276 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 UQCC1Q9NVA1 299 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 S4R3C0 116 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 JMJD1CQ15652 2540 aa2.74□□□□□ -1.97
MCF2-202ENST00000370573 IGKV1D-37A0A075B6S9 117 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 BORCS7-ASMTA0A0B4J1R7 106 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 TRBV9A0A0B4J1U6 114 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 UBE2L5PA0A1B0GUS4 154 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 TMEM218A2RU14 115 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 NDUFS6O75380 124 aaKnown RBP2.73□□□□□ -1.97
MCF2-202ENST00000370573 EIF3GO75821 320 aaKnown RBP eCLIP2.73□□□□□ -1.97
MCF2-202ENST00000370573 OR2J3O76001 311 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 DFFBO76075 338 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 FAM157CP0CG43 387 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 DEFA4P12838 97 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 ATP6V0CP27449 155 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 RAB5CP51148 216 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 HILS1P60008 231 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 RAB2AP61019 212 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 UBA52P62987 128 aaKnown RBP2.73□□□□□ -1.97
MCF2-202ENST00000370573 KIAA0141Q14154 515 aaPredicted RBP2.73□□□□□ -1.97
MCF2-202ENST00000370573 ALKAL2Q6UX46 152 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 HSD17B11Q8NBQ5 300 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 ZNF418Q8TF45 676 aaPredicted RBP2.73□□□□□ -1.97
MCF2-202ENST00000370573 CACNG8Q8WXS5 425 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 ACY3Q96HD9 319 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 LINC00052Q96N35 136 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 PFDN5Q99471 154 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 MGST2Q99735 147 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 PARD6GQ9BYG4 376 aaPredicted RBP2.73□□□□□ -1.97
MCF2-202ENST00000370573 WDR61Q9GZS3 305 aaKnown RBP2.73□□□□□ -1.97
MCF2-202ENST00000370573 ZNF580Q9UK33 172 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 SERTM2A0A1B0GWG4 89 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 SMCO3A2RU48 225 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 FNDC10F2Z333 226 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 IFNA5P01569 189 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 IGHV3-23P01764 117 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 MBP02144 154 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 LINC00869P0C866 280 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 TPT1P13693 172 aaKnown RBP2.73□□□□□ -1.97
MCF2-202ENST00000370573 FGF7P21781 194 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 OPRK1P41145 380 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 RND2P52198 227 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 RHOGP84095 191 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 FAM74A1Q5RGS3 127 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 TMEM144Q7Z5S9 345 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 ZNF329Q86UD4 541 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 PCNPQ8WW12 178 aaKnown RBP2.73□□□□□ -1.97
MCF2-202ENST00000370573 TMED6Q8WW62 240 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 ZNF414Q96IQ9 312 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 RSG1Q9BU20 258 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 NPCDR1Q9BY65 106 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 NPVFQ9HCQ7 196 aa2.73□□□□□ -1.97
MCF2-202ENST00000370573 C2CD3Q4AC94 2353 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 C1orf196B1AJZ1 125 aa2.72□□□□□ -1.97
MCF2-202ENST00000370573 TSTD3H0UI37 97 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 717.6 ms