RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 KNTC1P50748 2209 aa12.9□□□□□ -0.34
CHD1L-203ENST00000369259 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.34
CHD1L-203ENST00000369259 CGB1A6NKQ9 187 aa12.9□□□□□ -0.34
CHD1L-203ENST00000369259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-203ENST00000369259 K7EQM0 130 aa12.9□□□□□ -0.34
CHD1L-203ENST00000369259 HOXB4P17483 251 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-203ENST00000369259 KIR2DL2P43627 348 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-203ENST00000369259 MBNL2Q5VZF2 373 aaKnown RBP12.9□□□□□ -0.34
CHD1L-203ENST00000369259 SH2D6Q7Z4S9 175 aa12.9□□□□□ -0.34
CHD1L-203ENST00000369259 TPPP3Q9BW30 176 aa12.9□□□□□ -0.34
CHD1L-203ENST00000369259 NHP2Q9NX24 153 aaKnown RBP12.9□□□□□ -0.34
CHD1L-203ENST00000369259 ZNRD1Q9P1U0 126 aa12.9□□□□□ -0.34
CHD1L-203ENST00000369259 MEOX1P50221 254 aa12.89□□□□□ -0.35
CHD1L-203ENST00000369259 ETDBQ3ZM63 59 aa12.89□□□□□ -0.35
CHD1L-203ENST00000369259 ORMDL3Q8N138 153 aa12.89□□□□□ -0.35
CHD1L-203ENST00000369259 TRGV9Q99603 122 aa12.89□□□□□ -0.35
CHD1L-203ENST00000369259 C10orf55Q5SWW7 151 aa12.89□□□□□ -0.35
CHD1L-203ENST00000369259 ZNF48Q96MX3 618 aaPredicted RBP12.89□□□□□ -0.35
CHD1L-203ENST00000369259 TM2D2Q9BX73 214 aa12.89□□□□□ -0.35
CHD1L-203ENST00000369259 DEFB127Q9H1M4 99 aa12.89□□□□□ -0.35
CHD1L-203ENST00000369259 IGKV2D-26A0A0A0MRZ7 120 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 IGLL5B9A064 214 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 SLC25A17O43808 307 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 CECR9P0C854 216 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 FAM104BQ5XKR9 115 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 RUSC1-AS1Q66K80 236 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 C6orf15Q6UXA7 325 aaPredicted RBP12.88□□□□□ -0.35
CHD1L-203ENST00000369259 C8orf46Q8TAG6 207 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 TMEM167AQ8TBQ9 72 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 ARPC1AQ92747 370 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 FRYLO94915 3013 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 CEND1Q8N111 149 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 MRPL20Q9BYC9 149 aaKnown RBP12.88□□□□□ -0.35
CHD1L-203ENST00000369259 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
CHD1L-203ENST00000369259 COL6A3P12111 3177 aa12.88□□□□□ -0.35
CHD1L-203ENST00000369259 WI2-2373I1.2A0A1W2PRP0 233 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 H3BMG7 143 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 Q6ZT83 130 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 ZNF833PQ6ZTB9 187 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 MOGAT3Q86VF5 341 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 EXOC3-AS1Q8N2X6 119 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 OR10X1Q8NGY0 326 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 GEMIN7Q9H840 131 aaKnown RBP12.87□□□□□ -0.35
CHD1L-203ENST00000369259 DYSFO75923 2080 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 PCNX2A6NKB5 2137 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 CRYGCP07315 174 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 MC5RP33032 325 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 SPRNQ5BIV9 151 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 DUX4L9Q6RFH8 374 aaPredicted RBP12.87□□□□□ -0.35
CHD1L-203ENST00000369259 AMN1Q8IY45 258 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 ZNF479Q96JC4 524 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 TTTY13Q9BZ97 58 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 SPRR3Q9UBC9 169 aa12.87□□□□□ -0.35
CHD1L-203ENST00000369259 TRBV25-1A0A075B6N4 114 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 SHISA9B4DS77 424 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 LHBP01229 141 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 FAM201AQ5SY85 155 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 ZNF502Q8TBZ5 544 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 LINC00574Q9H8X3 128 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 ATP5G2Q06055 141 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 MTURNQ8N3F0 131 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 HHLA3Q9XRX5 114 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 NBEAQ8NFP9 2946 aa12.86□□□□□ -0.35
CHD1L-203ENST00000369259 TMEM213A2RRL7 107 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 SRSF1Q07955 248 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHD1L-203ENST00000369259 TMEM30BQ3MIR4 351 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 TMEM75Q8N9X5 138 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 ZMAT4Q9H898 229 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 MRPL16Q9NX20 251 aaKnown RBP12.85□□□□□ -0.35
CHD1L-203ENST00000369259 VSTM5A8MXK1 200 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 CRIP1P50238 77 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
CHD1L-203ENST00000369259 ZNF562Q6V9R5 426 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 RITA1Q96K30 269 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 TMEM14CQ9P0S9 112 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 HIGD1AQ9Y241 93 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 FREM2Q5SZK8 3169 aa12.85□□□□□ -0.35
CHD1L-203ENST00000369259 TRGV5A0A0B4J1U4 118 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 KLRC4-KLRK1H3BQV0 150 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 K7ESF4 209 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 LYZL1Q6UWQ5 148 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 ASCL2Q99929 193 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 TNFRSF1AP19438 455 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 INSL3P51460 131 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 ODF1Q14990 250 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 PRO0461Q9UI25 63 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 PSG8Q9UQ74 426 aa12.84□□□□□ -0.35
CHD1L-203ENST00000369259 A0A1W2PPI3 338 aa12.83□□□□□ -0.36
CHD1L-203ENST00000369259 PEAR1Q5VY43 1037 aaPredicted RBP12.83□□□□□ -0.36
CHD1L-203ENST00000369259 OR4C13Q8NGP0 309 aa12.83□□□□□ -0.36
CHD1L-203ENST00000369259 NPIPB5A8MRT5 1133 aa12.83□□□□□ -0.36
CHD1L-203ENST00000369259 C16orf97H3BN30 126 aa12.83□□□□□ -0.36
CHD1L-203ENST00000369259 K7EMI3 77 aa12.83□□□□□ -0.36
CHD1L-203ENST00000369259 TM4SF5O14894 197 aa12.83□□□□□ -0.36
CHD1L-203ENST00000369259 NPYP01303 97 aa12.83□□□□□ -0.36
CHD1L-203ENST00000369259 AMTNQ6UX39 209 aa12.83□□□□□ -0.36
CHD1L-203ENST00000369259 ZNF71Q9NQZ8 489 aaPredicted RBP12.83□□□□□ -0.36
CHD1L-203ENST00000369259 EVI2AP22794 236 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms