RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 IFNA10P01566 189 aa11.33□□□□□ -0.6
PDGFA-201ENST00000354513 FXYD7P58549 80 aa11.33□□□□□ -0.6
PDGFA-201ENST00000354513 LRRC37A5PQ49AS3 106 aa11.33□□□□□ -0.6
PDGFA-201ENST00000354513 SAV1Q9H4B6 383 aaPredicted RBP11.33□□□□□ -0.6
PDGFA-201ENST00000354513 U3KQ87 197 aa11.33□□□□□ -0.6
PDGFA-201ENST00000354513 A0A1B0GVG6 124 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 L7N2F9 121 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 IGKV3-20P01619 116 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 RLN2P04090 185 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 GIPP09681 153 aaPredicted RBP11.32□□□□□ -0.6
PDGFA-201ENST00000354513 VAMP2P63027 116 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 GAMTQ14353 236 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 LINC00336Q6ZUF6 198 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 POM121L12Q8N7R1 296 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 PPP1R1CQ8WVI7 109 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 SMIM8Q96KF7 97 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 C17orf77Q96MU5 243 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 PSENENQ9NZ42 101 aa11.32□□□□□ -0.6
PDGFA-201ENST00000354513 PAIP2BQ9ULR5 123 aaKnown RBP11.32□□□□□ -0.6
PDGFA-201ENST00000354513 IGKV1OR2-108A0A075B7D4 117 aa11.31□□□□□ -0.6
PDGFA-201ENST00000354513 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
PDGFA-201ENST00000354513 RPP30P78346 268 aaKnown RBP11.31□□□□□ -0.6
PDGFA-201ENST00000354513 SPANXN5Q5MJ07 72 aa11.31□□□□□ -0.6
PDGFA-201ENST00000354513 OR8G2PQ6IF36 304 aa11.31□□□□□ -0.6
PDGFA-201ENST00000354513 NOXA1Q86UR1 476 aa11.31□□□□□ -0.6
PDGFA-201ENST00000354513 CHAC2Q8WUX2 184 aa11.31□□□□□ -0.6
PDGFA-201ENST00000354513 ASB13Q8WXK3 278 aa11.31□□□□□ -0.6
PDGFA-201ENST00000354513 PBDC1Q9BVG4 233 aa11.31□□□□□ -0.6
PDGFA-201ENST00000354513 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
PDGFA-201ENST00000354513 H3BP45 60 aa11.3□□□□□ -0.6
PDGFA-201ENST00000354513 PAX9P55771 341 aa11.3□□□□□ -0.6
PDGFA-201ENST00000354513 ATP5IP56385 69 aaPredicted RBP11.3□□□□□ -0.6
PDGFA-201ENST00000354513 TAS2R30P59541 319 aa11.3□□□□□ -0.6
PDGFA-201ENST00000354513 RAP2BP61225 183 aa11.3□□□□□ -0.6
PDGFA-201ENST00000354513 NUTF2P61970 127 aaKnown RBP11.3□□□□□ -0.6
PDGFA-201ENST00000354513 FOXI2Q6ZQN5 318 aa11.3□□□□□ -0.6
PDGFA-201ENST00000354513 CLUHP3Q96NS8 147 aa11.3□□□□□ -0.6
PDGFA-201ENST00000354513 NDUFAF3Q9BU61 184 aa11.3□□□□□ -0.6
PDGFA-201ENST00000354513 PLA2G2EQ9NZK7 142 aa11.3□□□□□ -0.6
PDGFA-201ENST00000354513 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
PDGFA-201ENST00000354513 F6UB75 175 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 M0R2N4 97 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 MPC2O95563 127 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 PET100P0DJ07 73 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 P0DMU3 169 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 FAM231AP0DMU4 169 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 FAM231CP0DMU5 169 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 RYR1P21817 5038 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 GPX4P36969 197 aaPredicted RBP11.29□□□□□ -0.6
PDGFA-201ENST00000354513 PSMB3P49720 205 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 BCAP31P51572 246 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 RAB11AP62491 216 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 C20orf173Q96LM9 149 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 C11orf1Q9H5F2 150 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 OR5AC2Q9NZP5 309 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
PDGFA-201ENST00000354513 ZFP92A6NM28 416 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 A8MTW9 85 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 E5RGE8 158 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 H0YIZ8 118 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 TSC22D2O75157 780 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 CAV2P51636 162 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 EMP1P54849 157 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 LYZP61626 148 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 OR2F1Q13607 317 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 THAP8Q8NA92 274 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 OR2T35Q8NGX2 323 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
PDGFA-201ENST00000354513 HSPG2P98160 4391 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 IGHV3OR16-12A0A075B7B8 117 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 FAM24AA6NFZ4 105 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 SMIM9A6NGZ8 99 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 PRSS29PA6NIE9 313 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 SPART-AS1P0CW21 52 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 NUP62P37198 522 aaPredicted RBP11.27□□□□□ -0.61
PDGFA-201ENST00000354513 FGL1Q08830 312 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 C1orf194Q5T5A4 169 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 FAM222AQ5U5X8 452 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 Q6ZR54 194 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 THAP6Q8TBB0 222 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 SLC35E1Q96K37 410 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 MBD2Q9UBB5 411 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 RFNGQ9Y644 331 aa11.27□□□□□ -0.61
PDGFA-201ENST00000354513 A0A0J9YX75 114 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 METTL15P1P0C7V9 234 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 LGALS9BQ3B8N2 356 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 Q5BKY6 102 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 AMTNQ6UX39 209 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 TMEM14EPQ6UXP3 125 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 TRGV9Q99603 122 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 SLC25A32Q9H2D1 315 aa11.26□□□□□ -0.61
PDGFA-201ENST00000354513 LYRM2Q9NU23 88 aaPredicted RBP11.26□□□□□ -0.61
PDGFA-201ENST00000354513 ABCA13Q86UQ4 5058 aa11.25□□□□□ -0.61
PDGFA-201ENST00000354513 TMEM189A5PLL7 270 aa11.25□□□□□ -0.61
PDGFA-201ENST00000354513 CCNKO75909 580 aa11.25□□□□□ -0.61
PDGFA-201ENST00000354513 TMEM182Q6ZP80 229 aaPredicted RBP11.25□□□□□ -0.61
PDGFA-201ENST00000354513 OR4B1Q8NGF8 309 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms