RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 Q6ZR03 302 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 SH2D1AO60880 128 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 PYY3Q5JQD4 70 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 FAM169BQ8N8A8 192 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 TNFSF13O75888 250 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 LCN12Q6JVE5 192 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 DOCK7Q96N67 2140 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 CACNA1GO43497 2377 aa13.01□□□□□ -0.33
PTPN11-201ENST00000351677 ORMDL2Q53FV1 153 aa13□□□□□ -0.33
PTPN11-201ENST00000351677 DUX4L9Q6RFH8 374 aaPredicted RBP13□□□□□ -0.33
PTPN11-201ENST00000351677 M0R1W7 72 aa13□□□□□ -0.33
PTPN11-201ENST00000351677 ZNF329Q86UD4 541 aa13□□□□□ -0.33
PTPN11-201ENST00000351677 C5orf30Q96GV9 206 aa13□□□□□ -0.33
PTPN11-201ENST00000351677 PAX9P55771 341 aa13□□□□□ -0.33
PTPN11-201ENST00000351677 DIDO1Q9BTC0 2240 aaKnown RBP12.99□□□□□ -0.33
PTPN11-201ENST00000351677 A0A1W2PPI3 338 aa12.99□□□□□ -0.33
PTPN11-201ENST00000351677 PSG3Q16557 428 aa12.99□□□□□ -0.33
PTPN11-201ENST00000351677 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
PTPN11-201ENST00000351677 OOSP1A8MZH6 123 aa12.99□□□□□ -0.33
PTPN11-201ENST00000351677 ZNF138P52744 262 aa12.99□□□□□ -0.33
PTPN11-201ENST00000351677 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
PTPN11-201ENST00000351677 LMO1P25800 156 aa12.99□□□□□ -0.33
PTPN11-201ENST00000351677 CNTFRP26992 372 aa12.98□□□□□ -0.33
PTPN11-201ENST00000351677 ZNF688P0C7X2 276 aa12.98□□□□□ -0.33
PTPN11-201ENST00000351677 TDGF1P13385 188 aa12.98□□□□□ -0.33
PTPN11-201ENST00000351677 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
PTPN11-201ENST00000351677 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
PTPN11-201ENST00000351677 hDV102S1A0JD36 115 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 IGKV1-39P01597 117 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 IGKV1D-39P04432 117 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 CD28P10747 220 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 LAGE3Q14657 143 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 RASL11AQ6T310 242 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 ZNF815PA8K554 130 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 GTSCR1Q86UQ5 136 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 IGHV3-73A0A0B4J1V6 119 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 ORAOV1Q8WV07 137 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 SRRM4A7MD48 611 aaKnown RBP12.97□□□□□ -0.33
PTPN11-201ENST00000351677 TOMM40O96008 361 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 TRGV11A0A075B6L2 103 aa12.97□□□□□ -0.33
PTPN11-201ENST00000351677 TRBV7-1A0A0A6YYK4 115 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 TRAV2A0A0B4J234 112 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 C3orf79P0CE67 100 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 NSUN5P1Q3KNT7 163 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 C3orf36Q3SXR2 165 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 FRMPD3Q5JV73 1810 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 DPH3Q96FX2 82 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 TANC1Q9C0D5 1861 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 C1orf194Q5T5A4 169 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 TMEM14BQ9NUH8 114 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 NBASA2RRP1 2371 aa12.96□□□□□ -0.33
PTPN11-201ENST00000351677 WIPF3A6NGB9 483 aa12.96□□□□□ -0.34
PTPN11-201ENST00000351677 SAA4P35542 130 aa12.96□□□□□ -0.34
PTPN11-201ENST00000351677 TRAV12-3A0A0B4J271 114 aa12.96□□□□□ -0.34
PTPN11-201ENST00000351677 SMKR1H3BMG3 65 aa12.96□□□□□ -0.34
PTPN11-201ENST00000351677 TSPAN13O95857 204 aa12.96□□□□□ -0.34
PTPN11-201ENST00000351677 MCRIP2Q9BUT9 160 aaKnown RBP12.96□□□□□ -0.34
PTPN11-201ENST00000351677 FCN3O75636 299 aa12.95□□□□□ -0.34
PTPN11-201ENST00000351677 FNDC10F2Z333 226 aa12.95□□□□□ -0.34
PTPN11-201ENST00000351677 ERCC8Q13216 396 aa12.95□□□□□ -0.34
PTPN11-201ENST00000351677 LINC00469Q8N7U9 141 aa12.95□□□□□ -0.34
PTPN11-201ENST00000351677 TMEM8BA6NDV4 472 aa12.95□□□□□ -0.34
PTPN11-201ENST00000351677 TMEM249Q2WGJ8 235 aa12.95□□□□□ -0.34
PTPN11-201ENST00000351677 TRBV7-9A0A0J9YWB2 115 aa12.95□□□□□ -0.34
PTPN11-201ENST00000351677 ITGB1BP1O14713 200 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 IGHV4-39P01824 125 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 A0A0U1RRA0 63 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 B4DSR2 109 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 ZNF726P1Q15940 193 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 C17orf58Q2M2W7 97 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 NAA38Q9BRA0 125 aaKnown RBP12.94□□□□□ -0.34
PTPN11-201ENST00000351677 Q86TA4 180 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 TRGV4A0A0C4DH28 118 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 CYYR1Q96J86 154 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 A0A1B0GUS0 222 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.94□□□□□ -0.34
PTPN11-201ENST00000351677 AMN1Q8IY45 258 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
PTPN11-201ENST00000351677 ERVK11-1P61568 191 aa12.93□□□□□ -0.34
PTPN11-201ENST00000351677 HOXA3O43365 443 aaPredicted RBP12.93□□□□□ -0.34
PTPN11-201ENST00000351677 PRTN3P24158 256 aa12.93□□□□□ -0.34
PTPN11-201ENST00000351677 DSCR9P59020 149 aa12.93□□□□□ -0.34
PTPN11-201ENST00000351677 C9orf139Q6ZV77 190 aa12.93□□□□□ -0.34
PTPN11-201ENST00000351677 USF3Q68DE3 2245 aa12.93□□□□□ -0.34
PTPN11-201ENST00000351677 TMEM155Q4W5P6 130 aa12.93□□□□□ -0.34
PTPN11-201ENST00000351677 MS4A6AQ9H2W1 248 aa12.93□□□□□ -0.34
PTPN11-201ENST00000351677 SHANK2-AS3Q9BTD1 123 aa12.93□□□□□ -0.34
PTPN11-201ENST00000351677 LYPD1Q8N2G4 141 aa12.92□□□□□ -0.34
PTPN11-201ENST00000351677 RNF182Q8N6D2 247 aa12.92□□□□□ -0.34
PTPN11-201ENST00000351677 RUSC1-AS1Q66K80 236 aa12.92□□□□□ -0.34
PTPN11-201ENST00000351677 NDUFA4L2Q9NRX3 87 aa12.92□□□□□ -0.34
PTPN11-201ENST00000351677 GUSBP1Q15486 140 aa12.92□□□□□ -0.34
PTPN11-201ENST00000351677 C14orf178Q8N769 122 aaPredicted RBP12.92□□□□□ -0.34
PTPN11-201ENST00000351677 HSD52Q0P140 79 aa12.92□□□□□ -0.34
PTPN11-201ENST00000351677 CFAP161Q6P656 301 aa12.92□□□□□ -0.34
PTPN11-201ENST00000351677 LSM4Q9Y4Z0 139 aaKnown RBP12.92□□□□□ -0.34
PTPN11-201ENST00000351677 RCHY1Q96PM5 261 aa12.91□□□□□ -0.34
PTPN11-201ENST00000351677 UNQ6494/PRO21346Q6UXR6 183 aa12.91□□□□□ -0.34
PTPN11-201ENST00000351677 ZNF664Q8N3J9 261 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 288.1 ms