RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 FGL1Q08830 312 aa11.5□□□□□ -0.57
H3F3C-201ENST00000340398 TMEM128Q5BJH2 165 aa11.5□□□□□ -0.57
H3F3C-201ENST00000340398 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
H3F3C-201ENST00000340398 SLIRPQ9GZT3 109 aaKnown RBP11.5□□□□□ -0.57
H3F3C-201ENST00000340398 TMED3Q9Y3Q3 217 aa11.5□□□□□ -0.57
H3F3C-201ENST00000340398 TRAV12-2A0A075B6T6 113 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 DUXBA0A1W2PPF3 345 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 H3BP45 60 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 SYNGR2O43760 224 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 MED6O75586 246 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 CFDP00746 253 aaPredicted RBP11.49□□□□□ -0.57
H3F3C-201ENST00000340398 HOXB5P09067 269 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 SLC25A6P12236 298 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 TNP2Q05952 138 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 SAMD13Q5VXD3 122 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 BAP18Q8IXM2 172 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 BPIFCQ8NFQ6 507 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 OR4D5Q8NGN0 318 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 TMEM147Q9BVK8 224 aa11.49□□□□□ -0.57
H3F3C-201ENST00000340398 SLC25A39Q9BZJ4 359 aaPredicted RBP11.49□□□□□ -0.57
H3F3C-201ENST00000340398 F5H768 121 aa11.48□□□□□ -0.57
H3F3C-201ENST00000340398 RAB2BQ8WUD1 216 aa11.48□□□□□ -0.57
H3F3C-201ENST00000340398 ATG101Q9BSB4 218 aa11.48□□□□□ -0.57
H3F3C-201ENST00000340398 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
H3F3C-201ENST00000340398 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 PLAC8L1A1L4L8 177 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
H3F3C-201ENST00000340398 SFT2D2O95562 160 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 NUDT3O95989 172 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 TMBIM6P55061 237 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 RPP30P78346 268 aaKnown RBP11.47□□□□□ -0.57
H3F3C-201ENST00000340398 AKR1C1Q04828 323 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 PPP1R1AQ13522 171 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
H3F3C-201ENST00000340398 CIB3Q96Q77 187 aaPredicted RBP11.47□□□□□ -0.57
H3F3C-201ENST00000340398 ABCA13Q86UQ4 5058 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 INSP01308 110 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 HTN1P15515 57 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 PYDC2Q56P42 97 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 ACOT7LQ6ZUV0 252 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 ZNF738Q8NE65 137 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 ZNRF2Q8NHG8 242 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 MCFD2Q8NI22 146 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 TRIM63Q969Q1 353 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 LINC01587Q99440 93 aa11.46□□□□□ -0.57
H3F3C-201ENST00000340398 PIGBOS1A0A0B4J2F0 54 aa11.45□□□□□ -0.58
H3F3C-201ENST00000340398 H3BRN7 92 aa11.45□□□□□ -0.58
H3F3C-201ENST00000340398 FAUP35544 74 aaKnown RBP11.45□□□□□ -0.58
H3F3C-201ENST00000340398 RHOBP62745 196 aa11.45□□□□□ -0.58
H3F3C-201ENST00000340398 CYP2G1PQ6ZSU1 146 aa11.45□□□□□ -0.58
H3F3C-201ENST00000340398 TMEM144Q7Z5S9 345 aa11.45□□□□□ -0.58
H3F3C-201ENST00000340398 TOMM5Q8N4H5 51 aa11.45□□□□□ -0.58
H3F3C-201ENST00000340398 GPR82Q96P67 336 aa11.45□□□□□ -0.58
H3F3C-201ENST00000340398 SHANK2-AS3Q9BTD1 123 aa11.45□□□□□ -0.58
H3F3C-201ENST00000340398 STRAPQ9Y3F4 350 aaKnown RBP11.45□□□□□ -0.58
H3F3C-201ENST00000340398 NBDYA0A0U1RRE5 68 aa11.44□□□□□ -0.58
H3F3C-201ENST00000340398 SMCO3A2RU48 225 aa11.44□□□□□ -0.58
H3F3C-201ENST00000340398 H3BMQ9 156 aa11.44□□□□□ -0.58
H3F3C-201ENST00000340398 ADAP1O75689 374 aa11.44□□□□□ -0.58
H3F3C-201ENST00000340398 CCNKO75909 580 aa11.44□□□□□ -0.58
H3F3C-201ENST00000340398 IL5P05113 134 aa11.44□□□□□ -0.58
H3F3C-201ENST00000340398 FAM3BP58499 235 aaPredicted RBP11.44□□□□□ -0.58
H3F3C-201ENST00000340398 POLR2GP62487 172 aaKnown RBP eCLIP11.44□□□□□ -0.58
H3F3C-201ENST00000340398 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
H3F3C-201ENST00000340398 UHRF2Q96PU4 802 aa11.44□□□□□ -0.58
H3F3C-201ENST00000340398 PMS2P5A8MQ11 134 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 BOLA2-SMG1P6H3BVE0 249 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 HYPMO75409 117 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 SNRPCP09234 159 aaKnown RBP11.43□□□□□ -0.58
H3F3C-201ENST00000340398 OR5G3P0C626 314 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 TSPOP30536 169 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 RAP2BP61225 183 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 B2MP61769 119 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 ID3Q02535 119 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 OR8A1Q8NGG7 326 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 BCL7BQ9BQE9 202 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 SLC25A21Q9BQT8 299 aaPredicted RBP11.43□□□□□ -0.58
H3F3C-201ENST00000340398 PSENENQ9NZ42 101 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 HIGD1AQ9Y241 93 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 LINC00588Q9Y4M8 146 aa11.43□□□□□ -0.58
H3F3C-201ENST00000340398 CBY3A6NI87 242 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
H3F3C-201ENST00000340398 CXCL3P19876 107 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 AP3S2P59780 193 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 RRAS2P62070 204 aaPredicted RBP11.42□□□□□ -0.58
H3F3C-201ENST00000340398 KIR3DS1Q14943 382 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 PSG3Q16557 428 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 PATE2Q6UY27 113 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 C6orf223Q8N319 242 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 RNF141Q8WVD5 230 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 PPP1R14DQ9NXH3 145 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 V9GYH0 126 aa11.42□□□□□ -0.58
H3F3C-201ENST00000340398 ATP5G1P05496 136 aa11.41□□□□□ -0.58
H3F3C-201ENST00000340398 LINC00869P0C866 280 aa11.41□□□□□ -0.58
H3F3C-201ENST00000340398 S100A7P31151 101 aa11.41□□□□□ -0.58
H3F3C-201ENST00000340398 ATP5G3P48201 142 aa11.41□□□□□ -0.58
H3F3C-201ENST00000340398 LRRC20Q8TCA0 184 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms