RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 LY6LH3BQJ8 138 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 M0QZ24 198 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 SIAH2O43255 324 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 OR5AL1P0C617 328 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 CD24P25063 80 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 COL8A1P27658 744 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 PRR31Q5SQ13 230 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 LINC00173Q6ZV60 143 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 GOLT1AQ6ZVE7 132 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 Q71RC1 249 aaPredicted RBP6.9□□□□□ -1.31
CLK1-201ENST00000321356 CIARTQ8N365 385 aaPredicted RBP6.9□□□□□ -1.31
CLK1-201ENST00000321356 SHANK2-AS3Q9BTD1 123 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 ST20Q9HBF5 79 aa6.9□□□□□ -1.31
CLK1-201ENST00000321356 APC2O95996 2303 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 OR4C46A6NHA9 309 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 B9A039 149 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 H3BRN7 92 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 K7EIM0 57 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 LEPROTL1O95214 131 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 APOBEC3AP31941 199 aaPredicted RBP6.89□□□□□ -1.31
CLK1-201ENST00000321356 HINT1P49773 126 aaPredicted RBP6.89□□□□□ -1.31
CLK1-201ENST00000321356 GFRALQ6UXV0 394 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 EXOC3-AS1Q8N2X6 119 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 TMEM75Q8N9X5 138 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 ABHD17AQ96GS6 310 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 RASL11BQ9BPW5 248 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 SCNM1Q9BWG6 230 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 RNF24Q9Y225 148 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 POLEQ07864 2286 aa6.89□□□□□ -1.31
CLK1-201ENST00000321356 GVINP1Q7Z2Y8 2422 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 CHEK1O14757 476 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 MRPS12O15235 138 aaKnown RBP6.88□□□□□ -1.31
CLK1-201ENST00000321356 LIPFP07098 398 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 PRB3Q04118 309 aaPredicted RBP6.88□□□□□ -1.31
CLK1-201ENST00000321356 SIGLEC15Q6ZMC9 328 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 PRNTQ86SH4 94 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 LYPD1Q8N2G4 141 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 RPEQ96AT9 228 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 ZC2HC1AQ96GY0 325 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 SH3BGRL2Q9UJC5 107 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
CLK1-201ENST00000321356 RIF1Q5UIP0 2472 aaKnown RBP6.88□□□□□ -1.31
CLK1-201ENST00000321356 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.87□□□□□ -1.31
CLK1-201ENST00000321356 PPIAL4CA0A0B4J2A2 164 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 A0A1B0GUT8 65 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 PPIAL4GP0DN37 164 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 RELQ04864 619 aaPredicted RBP6.87□□□□□ -1.31
CLK1-201ENST00000321356 LDLRAD2Q5SZI1 272 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 BPIFA4PQ86YQ2 179 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.87□□□□□ -1.31
CLK1-201ENST00000321356 A0A1B0GW15 77 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 LYNX1G3V0Z9 82 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 HLA-DRB1P01911 266 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 LYNX1P0DP58 116 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 COX7A1P24310 79 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 UNQ5815/PRO19632Q6UWF5 114 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 ZNF491Q8N8L2 437 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 NEU4Q8WWR8 484 aaPredicted RBP6.87□□□□□ -1.31
CLK1-201ENST00000321356 C17orf77Q96MU5 243 aa6.87□□□□□ -1.31
CLK1-201ENST00000321356 ZFHX2Q9C0A1 2572 aaPredicted RBP6.87□□□□□ -1.31
CLK1-201ENST00000321356 DCHS2Q6V1P9 2916 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 WI2-2373I1.2A0A1W2PRP0 233 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 TIMM23O14925 209 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 CCL25O15444 150 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 TCF21O43680 179 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 CD3EP07766 207 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 ARMS2P0C7Q2 107 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 SFTPCP11686 197 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 CRIP1P50238 77 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 RIGQ13278 110 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 PSG3Q16557 428 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 Q6AWC8 147 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 LY6G5BQ8NDX9 201 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 RNF125Q96EQ8 232 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 ZNF414Q96IQ9 312 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 TMEM191AQ9H0A3 160 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 PSG8Q9UQ74 426 aa6.86□□□□□ -1.31
CLK1-201ENST00000321356 TLN1Q9Y490 2541 aaKnown RBP6.86□□□□□ -1.31
CLK1-201ENST00000321356 ANKHD1Q8IWZ3 2542 aaKnown RBP6.86□□□□□ -1.31
CLK1-201ENST00000321356 hDV102S1A0JD36 115 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 K7EQM0 130 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 TOX4O94842 621 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 NDUFA3O95167 84 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 HTR1DP28221 377 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 ZNF138P52744 262 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 PLGLAQ15195 96 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 LINC01545Q5VT33 79 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 ZNF738Q8NE65 137 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 CFHR4Q92496 578 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 TMUB1Q9BVT8 246 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 MAP1LC3CQ9BXW4 147 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 TPRP12270 2363 aaKnown RBP6.85□□□□□ -1.31
CLK1-201ENST00000321356 DCHS1Q96JQ0 3298 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 NBR2O15453 112 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 CNIH1O95406 144 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 PDE6HQ13956 83 aa6.85□□□□□ -1.31
CLK1-201ENST00000321356 PRR30Q53SZ7 412 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms