RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 PRR20EP86478 221 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 PRR20CP86479 221 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 PRR20DP86480 221 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 PRR20BP86481 221 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 PRR20AP86496 221 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 TAL2Q16559 108 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 CT83Q5H943 113 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 FGFRL1Q8N441 504 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 BAALCQ8WXS3 180 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 FAM234AQ9H0X4 552 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 LAMA2P24043 3122 aaKnown RBP5.32□□□□□ -1.56
ZNF540-201ENST00000316433 FSTL3O95633 263 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 PSMB2P49721 201 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 PSMG4Q5JS54 123 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 GUSBP11Q6P575 273 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 C20orf204Q6ZNR8 217 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 C16orf47Q6ZP98 133 aaPredicted RBP5.32□□□□□ -1.56
ZNF540-201ENST00000316433 ZNF414Q96IQ9 312 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 FZR1Q9UM11 496 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 PROCRQ9UNN8 238 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 TRAV8-2A0A0B4J237 113 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 A8MWV9 139 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 DUSP14O95147 198 aaKnown RBP5.32□□□□□ -1.56
ZNF540-201ENST00000316433 HERVK_113P63121 156 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 TNFAIP6P98066 277 aaPredicted RBP5.32□□□□□ -1.56
ZNF540-201ENST00000316433 OXLD1Q5BKU9 147 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 FAM214BQ7L5A3 538 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 TMEM219Q86XT9 240 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 RPRMLQ8N4K4 120 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 ANKRD29Q8N6D5 301 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 MGST2Q99735 147 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 CHCHD5Q9BSY4 110 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 TTTY13Q9BZ97 58 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 TMEM167BQ9NRX6 74 aa5.32□□□□□ -1.56
ZNF540-201ENST00000316433 IGKV2D-26A0A0A0MRZ7 120 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 OOSP1A8MZH6 123 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 OR2H2O95918 312 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 IGKV3-15P01624 115 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 CRYGBP07316 175 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 ZNF137PP52743 207 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 SRYQ05066 204 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 Q0VFX4 171 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 C9orf153Q5TBE3 101 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 MORN3Q6PF18 240 aaPredicted RBP5.31□□□□□ -1.56
ZNF540-201ENST00000316433 SBSPONQ8IVN8 264 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 ZNRF2Q8NHG8 242 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 PLPPR2Q96GM1 343 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 TMSB15BA0A087X1C1 80 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 MRPL33O75394 65 aaKnown RBP5.31□□□□□ -1.56
ZNF540-201ENST00000316433 ORM1P02763 201 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 IL4P05112 153 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 IGFL2Q6UWQ7 119 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 MOB3BQ86TA1 216 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 TMEM158Q8WZ71 300 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 TMEM14BQ9NUH8 114 aa5.31□□□□□ -1.56
ZNF540-201ENST00000316433 A0A096LNJ9 63 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 MBD3L4A6NDZ8 208 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-201ENST00000316433 MBD3L3A6NE82 208 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-201ENST00000316433 MBD3L5A6NJ08 208 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-201ENST00000316433 PF4P02776 101 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 SEC61GP60059 68 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 GNG5P63218 68 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 UTF1Q5T230 341 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 WDR86Q86TI4 376 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 RND1Q92730 232 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 ZNF714Q96N38 554 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 PRRG4Q9BZD6 226 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 CXXC4Q9H2H0 198 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 IFI27L2Q9H2X8 130 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 TANC2Q9HCD6 1990 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 J3QLI3 93 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 CXCL13O43927 109 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 SRSF2Q01130 221 aaKnown RBP5.3□□□□□ -1.56
ZNF540-201ENST00000316433 C11orf53Q8IXP5 236 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 C10orf126Q8N4M7 172 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 C15orf53Q8NAA6 179 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 OR4C13Q8NGP0 309 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 PRSS3P2Q8NHM4 247 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 SSMEM1Q8WWF3 244 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 RAXQ9Y2V3 346 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 KLF13Q9Y2Y9 288 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-201ENST00000316433 LAMA3Q16787 3333 aa5.3□□□□□ -1.56
ZNF540-201ENST00000316433 COL8A2P25067 703 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 FLYWCH2Q96CP2 140 aaKnown RBP5.29□□□□□ -1.56
ZNF540-201ENST00000316433 PLEKHA3Q9HB20 300 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 SPANXCQ9NY87 97 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 TRAV8-1A0A0A6YYK1 113 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 C15orf61A6NNL5 157 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 TM4SF5O14894 197 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 C2orf83Q53S99 150 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 SPINK9Q5DT21 86 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 LYRM7Q5U5X0 104 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 DUX4L9Q6RFH8 374 aaPredicted RBP5.29□□□□□ -1.56
ZNF540-201ENST00000316433 MIR17HGQ75NE6 70 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 COQ2Q96H96 371 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 C1orf159Q96HA4 380 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 HIST1H4GQ99525 98 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 DKK2Q9UBU2 259 aa5.29□□□□□ -1.56
ZNF540-201ENST00000316433 DYSFO75923 2080 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms