RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CDC42EP3Q9UKI2 254 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 LINC00587B1AMM8 73 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 C9JCJ5 164 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 TCRAP04437 139 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 CD33P20138 364 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 RRN3P1Q2M238 152 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 DEFB113Q30KQ7 82 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 FAM74A4Q5TZK3 123 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 Q6ZN92 141 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 Q6ZPA2 131 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 LINC01551Q86U37 167 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 NCKAP5O14513 1909 aa10.92□□□□□ -0.66
DDX54-202ENST00000314045 C9JQL5 133 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 M0R3E3 92 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 OVOL3O00110 214 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 SMIM6P0DI80 62 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
DDX54-202ENST00000314045 MYOZ3Q8TDC0 251 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 PEF1Q9UBV8 284 aaKnown RBP10.91□□□□□ -0.66
DDX54-202ENST00000314045 ARHGAP21Q5T5U3 1957 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 ASIPP42127 132 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 YPEL3P61236 119 aaPredicted RBP10.91□□□□□ -0.66
DDX54-202ENST00000314045 FER1L6-AS1Q8NA97 138 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 PLXNB1O43157 2135 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 IGKV2-40A0A087WW87 121 aaPredicted RBP10.91□□□□□ -0.66
DDX54-202ENST00000314045 IGKV2D-40P01614 121 aaPredicted RBP10.91□□□□□ -0.66
DDX54-202ENST00000314045 IGLV1-47P01700 117 aa10.91□□□□□ -0.66
DDX54-202ENST00000314045 ZFP36P26651 326 aaKnown RBP10.91□□□□□ -0.66
DDX54-202ENST00000314045 IGLC7A0M8Q6 106 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 CA1P00915 261 aaPredicted RBP10.9□□□□□ -0.66
DDX54-202ENST00000314045 NSUN5P1Q3KNT7 163 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 MAP1LC3AQ9H492 121 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 ZNF462Q96JM2 2506 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 NPIPB5A8MRT5 1133 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 HNRNPA3P51991 378 aaKnown RBP10.9□□□□□ -0.66
DDX54-202ENST00000314045 Q6AWC8 147 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 TMEM136Q6ZRR5 245 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 C5orf30Q96GV9 206 aa10.9□□□□□ -0.66
DDX54-202ENST00000314045 FNDC4Q9H6D8 234 aaPredicted RBP10.9□□□□□ -0.66
DDX54-202ENST00000314045 IZUMO1RA6ND01 250 aa10.9□□□□□ -0.67
DDX54-202ENST00000314045 CGB3P0DN86 165 aa10.9□□□□□ -0.67
DDX54-202ENST00000314045 CGB7P0DN87 165 aa10.9□□□□□ -0.67
DDX54-202ENST00000314045 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 BTF3P20290 206 aaKnown RBP10.89□□□□□ -0.67
DDX54-202ENST00000314045 PSMG4Q5JS54 123 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 IGFL4Q6B9Z1 124 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 LCNL1Q6ZST4 164 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 RHPN1-AS1Q9BWJ2 59 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 PKD1L2Q7Z442 2459 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 TRANK1O15050 2925 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 TRBV20OR9-2A0A075B6H5 130 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 CENPVL3A0A0U1RRI6 287 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 IGLV2-14P01704 120 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
DDX54-202ENST00000314045 OVOL1O14753 267 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
DDX54-202ENST00000314045 ZNF726P1Q15940 193 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 DEFB112Q30KQ8 113 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 SOX21Q9Y651 276 aaPredicted RBP10.88□□□□□ -0.67
DDX54-202ENST00000314045 DOPEY1Q5JWR5 2465 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 JMJD1CQ15652 2540 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 DUSP14O95147 198 aaKnown RBP10.88□□□□□ -0.67
DDX54-202ENST00000314045 LEPROTL1O95214 131 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 TMEM249Q2WGJ8 235 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 FBLN7Q53RD9 439 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 C1QL4Q86Z23 238 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 Q8N7P7 452 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 IGHV4-38-2P0DP08 117 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 ZNF841Q6ZN19 808 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 NUDT10Q8NFP7 164 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 NUDT11Q96G61 164 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 LINC00479Q96M42 142 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 KIAA1549Q9HCM3 1950 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 ABCA12Q86UK0 2595 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 OR4C46A6NHA9 309 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 IGLC1P0CG04 106 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 SYNJ2BPP57105 145 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 IL17RELQ6ZVW7 336 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 TCF23Q7RTU1 214 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 LYPD1Q8N2G4 141 aa10.88□□□□□ -0.67
DDX54-202ENST00000314045 PROP1O75360 226 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 RITA1Q96K30 269 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 DUX3Q96PT4 197 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 DAZ1Q9NQZ3 744 aaKnown RBP10.87□□□□□ -0.67
DDX54-202ENST00000314045 SETD2Q9BYW2 2564 aaPredicted RBP10.87□□□□□ -0.67
DDX54-202ENST00000314045 IGHV4-59P01825 116 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 PAX1P15863 534 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 PPIFP30405 207 aaKnown RBP10.87□□□□□ -0.67
DDX54-202ENST00000314045 ZNF56Q15929 161 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 LCN12Q6JVE5 192 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 ODF3L1Q8IXM7 274 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 WFDC12Q8WWY7 111 aa10.87□□□□□ -0.67
DDX54-202ENST00000314045 TMEM242Q9NWH2 141 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms