RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 NDUFC2-KCTD14E9PQ53 114 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 J3QRK9 145 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 HMGN4O00479 90 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 OVOL1O14753 267 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 GSTZ1O43708 216 aaPredicted RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 CD5LO43866 347 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 ZNF253O75346 499 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 NRASP01111 189 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 ADRA2AP08913 450 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 SMIM17P0DL12 118 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 BCL2P10415 239 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 POLR2JP52435 117 aaKnown RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 CRISP3P54108 245 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 LINC01547P58512 204 aaPredicted RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 COPZ1P61923 177 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 RPS11P62280 158 aaKnown RBP eCLIP3.3□□□□□ -1.88
CD44-202ENST00000278385 RPS25P62851 125 aaKnown RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 CXCL6P80162 114 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 GTF3C1Q12789 2109 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 GLYATL3Q5SZD4 288 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 MRPL2Q5T653 305 aaKnown RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 RASL11AQ6T310 242 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 MOB1BQ7L9L4 216 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 LINC01551Q86U37 167 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 LRP11Q86VZ4 500 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 ZNF555Q8NEP9 628 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 RTN4IP1Q8WWV3 396 aaPredicted RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 ERMAPQ96PL5 475 aaPredicted RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 CCL13Q99616 98 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 HSD17B10Q99714 261 aaKnown RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 SDF2L1Q9HCN8 221 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 MRPL16Q9NX20 251 aaKnown RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 TVP23BQ9NYZ1 205 aa3.3□□□□□ -1.88
CD44-202ENST00000278385 ZNF230Q9UIE0 474 aaPredicted RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 AMMECR1Q9Y4X0 333 aaPredicted RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 SPTBN1Q01082 2364 aaKnown RBP3.3□□□□□ -1.88
CD44-202ENST00000278385 NOTCH2Q04721 2471 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 IGHV3-15A0A0B4J1V0 119 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 IGHV3-74A0A0B4J1X5 117 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 TRAV5A0A0B4J249 113 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 TRDV1A0A1B0GX56 115 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 A0A1W2PPR1 153 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 A8MXK9 166 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 B4DEV8 164 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 H7BYZ3 331 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 CORTO00230 105 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 LST1O00453 97 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 OR7C2O60412 319 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 MRPL33O75394 65 aaKnown RBP3.29□□□□□ -1.88
CD44-202ENST00000278385 OPN1SWP03999 348 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 HLA-DPB1P04440 258 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 AZU1P20160 251 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 GABARAPL2P60520 117 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 PPP3R1P63098 170 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 FUT5Q11128 374 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 KRTAP27-1Q3LI81 207 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 NCMAPQ5T1S8 102 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 EBLN2Q6P2I7 272 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 ZNF497Q6ZNH5 498 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 C1orf174Q8IYL3 243 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 SLC22A24Q8N4F4 322 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 Q8NBF4 154 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 C7orf33Q8WU49 177 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 MUCL1Q96DR8 90 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 ABHD14BQ96IU4 210 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 CCL19Q99731 98 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 NRIP2Q9BQI9 281 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 RTL8AQ9BWD3 113 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 ZNF471Q9BX82 626 aaPredicted RBP3.29□□□□□ -1.88
CD44-202ENST00000278385 BCL2L10Q9HD36 194 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 CTSZQ9UBR2 303 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 TNFSF18Q9UNG2 199 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 COL12A1Q99715 3063 aa3.29□□□□□ -1.88
CD44-202ENST00000278385 SPTAN1Q13813 2472 aaKnown RBP3.29□□□□□ -1.88
CD44-202ENST00000278385 DSPPQ9NZW4 1301 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 NINQ8N4C6 2090 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 CREBBPQ92793 2442 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 A0A1W2PP18 115 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 TMEM72A0PK05 275 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 A8MUN3 132 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 OR2T1O43869 369 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 GABARAPO95166 117 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 IGHV3-23P01764 117 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 PATE4P0C8F1 98 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 OPRK1P41145 380 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 PKIAP61925 76 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 CDK6Q00534 326 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 SLC38A11Q08AI6 406 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 PSG7Q13046 419 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 KRTAP21-3Q3LHN1 58 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 Q5XG85 94 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 CEMP1Q6PRD7 247 aaPredicted RBP3.28□□□□□ -1.88
CD44-202ENST00000278385 SMIM29Q86T20 159 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 WDR86Q86TI4 376 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 LHFPL1Q86WI0 220 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 NPBQ8NG41 125 aa3.28□□□□□ -1.88
CD44-202ENST00000278385 OR10D4PQ8NGN7 298 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms