RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 RCHY1Q96PM5 261 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 MARF1Q9Y4F3 1742 aaKnown RBP5.61□□□□□ -1.51
POLR1A-201ENST00000263857 SYS1-DBNDD2H3BUS1 97 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 FOXG1P55316 489 aaPredicted RBP5.61□□□□□ -1.51
POLR1A-201ENST00000263857 ZAR1Q86SH2 424 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 C22orf46C9J442 243 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 K7EP34 96 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 RAMP1O60894 148 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 Q6ZT83 130 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 LINC00477Q96M19 166 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 MGAM2Q2M2H8 2515 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 A0A1B0GTL3 188 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 TAX1BP3O14907 124 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 AGMATQ9BSE5 352 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 RNASE7Q9H1E1 156 aaKnown RBP5.61□□□□□ -1.51
POLR1A-201ENST00000263857 ALPK3Q96L96 1907 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 COL22A1Q8NFW1 1626 aaPredicted RBP5.61□□□□□ -1.51
POLR1A-201ENST00000263857 TRBV5-3A0A0A0MS03 114 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 YPEL1O60688 119 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 MUC21Q5SSG8 566 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 YPEL2Q96QA6 119 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 HEPN1Q6WQI6 88 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 ZNF625Q96I27 306 aaPredicted RBP5.61□□□□□ -1.51
POLR1A-201ENST00000263857 SIPA1L1O43166 1804 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 TMEM243Q9BU79 118 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 IGHV1-45A0A0A0MS14 117 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 D6R8Y8 96 aa5.61□□□□□ -1.51
POLR1A-201ENST00000263857 PROB1E7EW31 1015 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 ZNF525Q8N782 197 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 IMMP1LQ96LU5 166 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 PRSS41Q7RTY9 318 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 WNT2P09544 360 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 C9orf118A6NHY6 69 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 MYF5P13349 255 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 CFHR2P36980 270 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 SRSF7Q16629 238 aaKnown RBP eCLIP5.6□□□□□ -1.511e-5■■■□□ 19.1
POLR1A-201ENST00000263857 OBSL1O75147 1896 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 IGHV3-49A0A0A0MS15 119 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 MSGN1A6NI15 193 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 SHISA9B4DS77 424 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 LINC00271P0C7V0 271 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 HLA-DMBP28068 263 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 ZNF826PQ6ZT77 177 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 TRPT1Q86TN4 253 aaKnown RBP5.6□□□□□ -1.51
POLR1A-201ENST00000263857 TRGV1A0A0A0MS02 117 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 FAM231BA6NCW3 169 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 ZC2HC1BQ5TFG8 222 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 IGLV1-36A0A0B4J1U3 117 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 SMAD7O15105 426 aaKnown RBP5.6□□□□□ -1.51
POLR1A-201ENST00000263857 LHBP01229 141 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 IGHG2P01859 326 aa5.6□□□□□ -1.51
POLR1A-201ENST00000263857 SRSF8Q9BRL6 282 aaKnown RBP5.6□□□□□ -1.51
POLR1A-201ENST00000263857 ZNF138P52744 262 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 A0A0J9YW62 118 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 A0A0U1RRA0 63 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 C12orf77C9JDV5 145 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 CD33P20138 364 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 IGHV3-66A0A0C4DH42 116 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 A0A1B0GX51 115 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 FAM223BA6NKX1 122 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 CISD3P0C7P0 127 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 FAM223AQ8IWN6 122 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 C18orf12Q96KH6 178 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 TRBV25-1A0A075B6N4 114 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 SCRT2Q9NQ03 307 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 COLCA1Q6ZS62 124 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 C1orf122Q6ZSJ8 110 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 C7orf69Q9H7B7 122 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 IL15RAQ13261 267 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 ZNF876PQ49A33 203 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 C16orf47Q6ZP98 133 aaPredicted RBP5.59□□□□□ -1.51
POLR1A-201ENST00000263857 RFNGQ9Y644 331 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 BAALCQ8WXS3 180 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 MESP1Q9BRJ9 268 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 CSTL1Q9H114 145 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 IGHV3-64A0A075B6Q5 118 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 GATA2P23769 480 aaPredicted RBP5.59□□□□□ -1.51
POLR1A-201ENST00000263857 GFI1BQ5VTD9 330 aa5.59□□□□□ -1.51
POLR1A-201ENST00000263857 IGHV3-35A0A0C4DH35 117 aa5.59□□□□□ -1.52
POLR1A-201ENST00000263857 PYY3Q5JQD4 70 aa5.59□□□□□ -1.52
POLR1A-201ENST00000263857 C1QTNF5Q9BXJ0 243 aa5.59□□□□□ -1.52
POLR1A-201ENST00000263857 ORMDL1Q9P0S3 153 aa5.59□□□□□ -1.52
POLR1A-201ENST00000263857 C20orf144Q9BQM9 153 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 LSM4Q9Y4Z0 139 aaKnown RBP5.58□□□□□ -1.52
POLR1A-201ENST00000263857 PLXNA3P51805 1871 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 ATP5G1P05496 136 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 ATP5G3P48201 142 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 WFDC9Q8NEX5 89 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 SAA2-SAA4A0A096LPE2 208 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 SRRM4A7MD48 611 aaKnown RBP5.58□□□□□ -1.52
POLR1A-201ENST00000263857 SAA2P0DJI9 122 aaPredicted RBP5.58□□□□□ -1.52
POLR1A-201ENST00000263857 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 SMIM2Q9BVW6 85 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 TMEM133Q9H2Q1 129 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 A0A087X0K7 114 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 A0A0A6YYD4 124 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 HOXB3P14651 431 aaPredicted RBP5.58□□□□□ -1.52
POLR1A-201ENST00000263857 EFNB3Q15768 340 aa5.58□□□□□ -1.52
POLR1A-201ENST00000263857 NYNRINQ9P2P1 1898 aaKnown RBP5.58□□□□□ -1.52
POLR1A-201ENST00000263857 CTSBP07858 339 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms