RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 C7orf71A4D174 169 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 TMEM238C9JI98 176 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 LY6HO94772 140 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 IGHV3-48P01763 117 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 HBDP02042 147 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 MYH7BA7E2Y1 1941 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 IGKV1D-42A0A075B6H8 117 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 GRIFINA4D1Z8 144 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 BUB3O43684 328 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 IGHV4-39P01824 125 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 HLA-DQB1P01920 261 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 SNRPCP09234 159 aaKnown RBP3.27□□□□□ -1.89
RNF38-201ENST00000259605 LINC00614P0C842 121 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 FHL1Q13642 323 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 CD300EQ496F6 205 aaPredicted RBP3.27□□□□□ -1.89
RNF38-201ENST00000259605 ZNF880Q6PDB4 577 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 LINC00482Q8N8I6 264 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 ZNF479Q96JC4 524 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 GAFA1Q96PS6 74 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 CAMK2N2Q96S95 79 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 IMMP2LQ96T52 175 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 TIMM17AQ99595 171 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 TRGV9Q99603 122 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 CHAC1Q9BUX1 264 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 PSG8Q9UQ74 426 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 CACNA1SQ13698 1873 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 PLCE1Q9P212 2302 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 ITGB1BP1O14713 200 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 BCL2P10415 239 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 LOXP28300 417 aaPredicted RBP3.27□□□□□ -1.89
RNF38-201ENST00000259605 RPL18AQ02543 176 aaKnown RBP3.27□□□□□ -1.89
RNF38-201ENST00000259605 PMCHL1Q16048 86 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 FBXL19-AS1Q494R0 122 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 DNLZQ5SXM8 178 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 ZNF414Q96IQ9 312 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 FBLN5Q9UBX5 448 aa3.27□□□□□ -1.89
RNF38-201ENST00000259605 TRAV13-1A0A0B4J241 112 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 SMIM9A6NGZ8 99 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 DNAJC9-AS1A6NH13 148 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 NDUFS5O43920 106 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 CBLN1P23435 193 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 CRYBB3P26998 211 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 SNRPEP62304 92 aaKnown RBP3.26□□□□□ -1.89
RNF38-201ENST00000259605 LAIR2Q6ISS4 152 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 LINC00322Q6ZN03 302 aaPredicted RBP3.26□□□□□ -1.89
RNF38-201ENST00000259605 C1orf229Q6ZS94 237 aaPredicted RBP3.26□□□□□ -1.89
RNF38-201ENST00000259605 MSRB3Q8IXL7 192 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 PSMG3Q9BT73 122 aaPredicted RBP3.26□□□□□ -1.89
RNF38-201ENST00000259605 RPP21Q9H633 154 aaKnown RBP3.26□□□□□ -1.89
RNF38-201ENST00000259605 FOLR2P14207 255 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 MEF2BQ02080 365 aaPredicted RBP3.26□□□□□ -1.89
RNF38-201ENST00000259605 CFHR3Q02985 330 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 UBE2V2Q15819 145 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 PRIMA1Q86XR5 153 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 U3KQK5 164 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 SPG11Q96JI7 2443 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 A0A0J9YY99 117 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 NDUFB4O95168 129 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 ZNF25P17030 456 aaPredicted RBP3.26□□□□□ -1.89
RNF38-201ENST00000259605 CCL1P22362 96 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 ATP6V0CP27449 155 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 PDE6HQ13956 83 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 DUX4L9Q6RFH8 374 aaPredicted RBP3.26□□□□□ -1.89
RNF38-201ENST00000259605 ZNF497Q6ZNH5 498 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 C4orf3Q8WVX3 66 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 DSCR8Q96T75 97 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 TMEM160Q9NX00 188 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 IL36BQ9NZH7 164 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 TAF1P21675 1872 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 TRAV26-2A0A0B4J265 109 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 IGHV7-4-1A0A0J9YVY3 117 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 HMSDA8MTL9 139 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 IGHV2-70P01814 119 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 PAX2Q02962 417 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 ZNF79Q15937 498 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 ZFAND6Q6FIF0 208 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 KAAG1Q9UBP8 84 aa3.26□□□□□ -1.89
RNF38-201ENST00000259605 PKDREJQ9NTG1 2253 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 TRIP12Q14669 1992 aaPredicted RBP3.25□□□□□ -1.89
RNF38-201ENST00000259605 ADMP35318 185 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 FAM3BP58499 235 aaPredicted RBP3.25□□□□□ -1.89
RNF38-201ENST00000259605 RBM3P98179 157 aaKnown RBP3.25□□□□□ -1.89
RNF38-201ENST00000259605 IGFL2Q6UWQ7 119 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 ZNF114Q8NC26 417 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 GTSF1Q8WW33 167 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 WFDC12Q8WWY7 111 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 ZNF706Q9Y5V0 76 aaPredicted RBP3.25□□□□□ -1.89
RNF38-201ENST00000259605 LY96Q9Y6Y9 160 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 A0A087X0M5 115 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 IGHV3-73A0A0B4J1V6 119 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 A0A1B0GX30 115 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 YPEL3P61236 119 aaPredicted RBP3.25□□□□□ -1.89
RNF38-201ENST00000259605 ATXN8Q156A1 80 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 TM2D1Q9BX74 207 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 SLC25A39Q9BZJ4 359 aaPredicted RBP3.25□□□□□ -1.89
RNF38-201ENST00000259605 CCDC168Q8NDH2 2452 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 TAF1LQ8IZX4 1826 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 DEFB131BA0A096LNP1 70 aa3.25□□□□□ -1.89
RNF38-201ENST00000259605 TRBV5-5A0A0J9YX44 114 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms