RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 IGHG4P01861 327 aa14.05□□□□□ -0.16
VIM-201ENST00000224237 HIST1H1EP10412 219 aaKnown RBP14.05□□□□□ -0.16
VIM-201ENST00000224237 TOMM20LQ6UXN7 152 aa14.05□□□□□ -0.16
VIM-201ENST00000224237 ZNF414Q96IQ9 312 aa14.05□□□□□ -0.16
VIM-201ENST00000224237 TCEAL7Q9BRU2 100 aa14.05□□□□□ -0.16
VIM-201ENST00000224237 KLK15Q9H2R5 256 aa14.05□□□□□ -0.16
VIM-201ENST00000224237 ZFAND3Q9H8U3 227 aa14.05□□□□□ -0.16
VIM-201ENST00000224237 ZNF702PQ9H963 129 aa14.05□□□□□ -0.16
VIM-201ENST00000224237 FLNBO75369 2602 aaKnown RBP14.04□□□□□ -0.16
VIM-201ENST00000224237 MTORP42345 2549 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 IGHV3-35A0A0C4DH35 117 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 CRYBB3P26998 211 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 RAB9AP51151 201 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 RPL23P62829 140 aaKnown RBP14.04□□□□□ -0.16
VIM-201ENST00000224237 ADIRFQ15847 76 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 OR4F17Q8NGA8 305 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 ELOVL1Q9BW60 279 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 TMEM89A2RUT3 159 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 PSMB8P28062 276 aa14.04□□□□□ -0.16
VIM-201ENST00000224237 RANP62826 216 aaKnown RBP14.04□□□□□ -0.16
VIM-201ENST00000224237 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.03□□□□□ -0.16
VIM-201ENST00000224237 SNRPCP09234 159 aaKnown RBP14.03□□□□□ -0.16
VIM-201ENST00000224237 ARL3P36405 182 aa14.03□□□□□ -0.16
VIM-201ENST00000224237 MYCNOSP40205 109 aa14.03□□□□□ -0.16
VIM-201ENST00000224237 ZNF329Q86UD4 541 aa14.03□□□□□ -0.16
VIM-201ENST00000224237 C1QL4Q86Z23 238 aa14.03□□□□□ -0.16
VIM-201ENST00000224237 CTDSP1Q9GZU7 261 aa14.03□□□□□ -0.16
VIM-201ENST00000224237 SAV1Q9H4B6 383 aaPredicted RBP14.03□□□□□ -0.16
VIM-201ENST00000224237 PPP5D1E7EU14 171 aa14.02□□□□□ -0.16
VIM-201ENST00000224237 IGLC2P0DOY2 106 aa14.02□□□□□ -0.16
VIM-201ENST00000224237 RPL35P42766 123 aaKnown RBP14.02□□□□□ -0.16
VIM-201ENST00000224237 SLC35B1P78383 322 aa14.02□□□□□ -0.16
VIM-201ENST00000224237 C2CD4CQ8TF44 421 aa14.02□□□□□ -0.16
VIM-201ENST00000224237 ZNF586Q9NXT0 402 aa14.02□□□□□ -0.16
VIM-201ENST00000224237 C9JCJ5 164 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 MRPS12O15235 138 aaKnown RBP14.01□□□□□ -0.17
VIM-201ENST00000224237 SCGB2A2Q13296 93 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 ELOBQ15370 118 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 TMEM160Q9NX00 188 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 TRBV20OR9-2A0A075B6H5 130 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 HELTA6NFD8 242 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 CLDN34H7C241 214 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 RPL7P18124 248 aaKnown RBP14.01□□□□□ -0.17
VIM-201ENST00000224237 LINC01551Q86U37 167 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 ZFP82Q8N141 532 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 Q8N2B8 174 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 TMEM190Q8WZ59 177 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 Q9H3A6 140 aa14.01□□□□□ -0.17
VIM-201ENST00000224237 PGPA6NDG6 321 aa14□□□□□ -0.17
VIM-201ENST00000224237 IGHV3-11P01762 117 aa14□□□□□ -0.17
VIM-201ENST00000224237 FAM209BQ5JX69 171 aa14□□□□□ -0.17
VIM-201ENST00000224237 TEX38Q6PEX7 206 aa14□□□□□ -0.17
VIM-201ENST00000224237 LCNL1Q6ZST4 164 aa14□□□□□ -0.17
VIM-201ENST00000224237 OR4X2Q8NGF9 303 aa14□□□□□ -0.17
VIM-201ENST00000224237 TRBV19A0A075B6N1 114 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 IGHV3OR16-8A0A075B7F1 116 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 PDE6HQ13956 83 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 C5orf17Q8NAS9 161 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 METTL26Q96S19 204 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 OTORQ9NRC9 128 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 LY96Q9Y6Y9 160 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 CUBNO60494 3623 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 CLPSL1A2RUU4 121 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 H3BTX0 84 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 PEX7O00628 323 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 TRBV12-3P01733 135 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 SLC25A5P05141 298 aaKnown RBP13.99□□□□□ -0.17
VIM-201ENST00000224237 OR8I2Q8N0Y5 310 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 LYPD1Q8N2G4 141 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 EPDR1Q9UM22 224 aa13.99□□□□□ -0.17
VIM-201ENST00000224237 DNAJC9-AS1A6NH13 148 aa13.98□□□□□ -0.17
VIM-201ENST00000224237 NDUFA4O00483 81 aa13.98□□□□□ -0.17
VIM-201ENST00000224237 CNN1P51911 297 aaKnown RBP13.98□□□□□ -0.17
VIM-201ENST00000224237 BUB3O43684 328 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 S100A6P06703 90 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 ELANEP08246 267 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 GNG4P50150 75 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 FOXE3Q13461 319 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 C10orf99Q6UWK7 81 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 CDC42EP3Q9UKI2 254 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 PGPEP1LA6NFU8 196 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 LY6G6DO95868 133 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 TAS2R60P59551 318 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 RPL15P61313 204 aaKnown RBP13.97□□□□□ -0.17
VIM-201ENST00000224237 CENPWQ5EE01 88 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 ANAPC16Q96DE5 110 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 GPR82Q96P67 336 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 ATG101Q9BSB4 218 aa13.97□□□□□ -0.17
VIM-201ENST00000224237 HIVEP2P31629 2446 aa13.96□□□□□ -0.17
VIM-201ENST00000224237 C5orf52A6NGY3 159 aa13.96□□□□□ -0.17
VIM-201ENST00000224237 RPS10P46783 165 aaKnown RBP13.96□□□□□ -0.17
VIM-201ENST00000224237 C1orf194Q5T5A4 169 aa13.96□□□□□ -0.17
VIM-201ENST00000224237 OCC1Q8TAD7 63 aa13.96□□□□□ -0.17
VIM-201ENST00000224237 C17orf77Q96MU5 243 aa13.96□□□□□ -0.17
VIM-201ENST00000224237 ESM1Q9NQ30 184 aa13.96□□□□□ -0.17
VIM-201ENST00000224237 PEF1Q9UBV8 284 aaKnown RBP13.96□□□□□ -0.17
VIM-201ENST00000224237 URGCP-MRPS24S4R325 110 aa13.96□□□□□ -0.17
VIM-201ENST00000224237 GGCTO75223 188 aaKnown RBP13.95□□□□□ -0.18
VIM-201ENST00000224237 SNRPEP62304 92 aaKnown RBP13.95□□□□□ -0.18
VIM-201ENST00000224237 GNG5P63218 68 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms