RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 MBD3L3A6NE82 208 aaPredicted RBP10.97□□□□□ -0.65
GABPB1-201ENST00000220429 MBD3L5A6NJ08 208 aaPredicted RBP10.97□□□□□ -0.65
GABPB1-201ENST00000220429 NDUFV3P56181 108 aaKnown RBP10.97□□□□□ -0.65
GABPB1-201ENST00000220429 NFE4Q86UQ8 179 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 PIP4P2Q8N4L2 257 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 MBD3L2Q8NHZ7 208 aaPredicted RBP10.97□□□□□ -0.65
GABPB1-201ENST00000220429 GVINP1Q7Z2Y8 2422 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 ICE1Q9Y2F5 2266 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 TRAV5A0A0B4J249 113 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 CENPVL3A0A0U1RRI6 287 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 MGST3O14880 152 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 TM4SF5O14894 197 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 IGFL3Q6UXB1 125 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 SSMEM1Q8WWF3 244 aa10.97□□□□□ -0.65
GABPB1-201ENST00000220429 CSDC2Q9Y534 153 aaKnown RBP10.97□□□□□ -0.65
GABPB1-201ENST00000220429 CHEK1O14757 476 aa10.96□□□□□ -0.65
GABPB1-201ENST00000220429 DRAM1Q8N682 238 aa10.96□□□□□ -0.65
GABPB1-201ENST00000220429 PRSS33Q8NF86 280 aa10.96□□□□□ -0.65
GABPB1-201ENST00000220429 SLC25A15Q9Y619 301 aa10.96□□□□□ -0.65
GABPB1-201ENST00000220429 ANKRD11Q6UB99 2663 aaPredicted RBP10.96□□□□□ -0.66
GABPB1-201ENST00000220429 TCRBV4S1A1TA0A5B7 111 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 TMEM30CPA0ZSE6 113 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 C12orf77C9JDV5 145 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 RHODO00212 210 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 P0C879 139 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 SRD5A1P18405 259 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 MBNL2Q5VZF2 373 aaKnown RBP10.96□□□□□ -0.66
GABPB1-201ENST00000220429 FAM53AQ6NSI3 398 aaPredicted RBP10.96□□□□□ -0.66
GABPB1-201ENST00000220429 MOGAT3Q86VF5 341 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 RPRMLQ8N4K4 120 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 COQ2Q96H96 371 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 TMEM167BQ9NRX6 74 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 MUC6Q6W4X9 2439 aa10.96□□□□□ -0.66
GABPB1-201ENST00000220429 TRBV20-1A0A075B6N2 111 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 TRAV25A0A0B4J276 109 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 FAM90A9PA6NNJ1 464 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 CSN1S1P47710 185 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 VCX2Q9H322 139 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 DMXL2Q8TDJ6 3036 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 CUL9Q8IWT3 2517 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
GABPB1-201ENST00000220429 CSN3P07498 182 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 MSMPQ1L6U9 139 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 Q6ZS92 163 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 PPP1R35Q8TAP8 253 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 SPANXA1Q9NS26 97 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 HIGD1BQ9P298 99 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 FAM215AQ9Y5M1 114 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 PLCE1Q9P212 2302 aa10.95□□□□□ -0.66
GABPB1-201ENST00000220429 SPTBN2O15020 2390 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 GGTLC3B5MD39 225 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 FNDC10F2Z333 226 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 K7EM74 188 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 LGALS9BQ3B8N2 356 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 LGALS9CQ6DKI2 356 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 PRR7Q8TB68 274 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 HEYLQ9NQ87 328 aaPredicted RBP10.94□□□□□ -0.66
GABPB1-201ENST00000220429 AP5S1Q9NUS5 200 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 SMG1Q96Q15 3661 aaKnown RBP10.94□□□□□ -0.66
GABPB1-201ENST00000220429 NPIPB6E9PJ23 425 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 ZNF808Q8N4W9 903 aaPredicted RBP10.94□□□□□ -0.66
GABPB1-201ENST00000220429 ZBTB34Q8NCN2 500 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 OR8A1Q8NGG7 326 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 NRGNQ92686 78 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 DCHS1Q96JQ0 3298 aa10.94□□□□□ -0.66
GABPB1-201ENST00000220429 RBP4P02753 201 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 ZNF816Q0VGE8 651 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-201ENST00000220429 ZNF474Q6S9Z5 364 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-201ENST00000220429 MIR17HGQ75NE6 70 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 FAM169BQ8N8A8 192 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 CHAC1Q9BUX1 264 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 ACACAQ13085 2346 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 TMEM8BA6NDV4 472 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 OOEPA6NGQ2 149 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 C16orf97H3BN30 126 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 RBMXL3Q8N7X1 1067 aaKnown RBP10.93□□□□□ -0.66
GABPB1-201ENST00000220429 PLPPR2Q96GM1 343 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 MAP1LC3AQ9H492 121 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 PLEKHA3Q9HB20 300 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 ZGRF1Q86YA3 2104 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 CEND1Q8N111 149 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
GABPB1-201ENST00000220429 SLC25A10Q9UBX3 287 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-201ENST00000220429 GAGE2BQ13066 116 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 GAGE2EQ4V326 116 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 CD177Q8N6Q3 437 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 C8orf46Q8TAG6 207 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 GAGE2DQ9UEU5 116 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 K7EMI3 77 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 ACTL6BO94805 426 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 IGHG4P01861 327 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 APOHP02749 345 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-201ENST00000220429 SMCPP49901 116 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-201ENST00000220429 ZNF137PP52743 207 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 EIF4EBP1Q13541 118 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-201ENST00000220429 TTC32Q5I0X7 151 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 CFAP126Q5VTH2 177 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 OR13A1Q8NGR1 328 aa10.92□□□□□ -0.66
GABPB1-201ENST00000220429 LINC00479Q96M42 142 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms