RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GOLT1AQ6ZVE7 132 aa13.72□□□□□ -0.21
USB1-201ENST00000219281 Q6ZVH6 145 aa13.72□□□□□ -0.21
USB1-201ENST00000219281 CHCHD1Q96BP2 118 aaKnown RBP13.72□□□□□ -0.21
USB1-201ENST00000219281 RBM14Q96PK6 669 aaKnown RBP13.72□□□□□ -0.21
USB1-201ENST00000219281 SPTBN4Q9H254 2564 aa13.72□□□□□ -0.21
USB1-201ENST00000219281 OR4C46A6NHA9 309 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 BUB1B-PAK6H3BSN5 160 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 VKORC1Q9BQB6 163 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 LOC102724200A0A096LPH7 203 aaPredicted RBP13.71□□□□□ -0.21
USB1-201ENST00000219281 NPIPB6E9PJ23 425 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 LYNX1G3V0Z9 82 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 IGLV2-11P01706 119 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 LYNX1P0DP58 116 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 PRB4P10163 310 aaPredicted RBP13.71□□□□□ -0.21
USB1-201ENST00000219281 COX7A1P24310 79 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 PAX2Q02962 417 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 UNQ5815/PRO19632Q6UWF5 114 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 TNFRSF14Q92956 283 aa13.71□□□□□ -0.21
USB1-201ENST00000219281 RALYQ9UKM9 306 aaKnown RBP13.71□□□□□ -0.21
USB1-201ENST00000219281 LEPROTL1O95214 131 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 OR4F17Q8NGA8 305 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 SRSF12Q8WXF0 261 aaKnown RBP13.7□□□□□ -0.22
USB1-201ENST00000219281 RASL11BQ9BPW5 248 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 TMEM14CQ9P0S9 112 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 SYS1-DBNDD2H3BUS1 97 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 I3L2K1 104 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 ZNF138P52744 262 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 RBPJQ06330 500 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 ASCL2Q99929 193 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 TP73-AS1Q9UF72 201 aa13.7□□□□□ -0.22
USB1-201ENST00000219281 FAM231BA6NCW3 169 aa13.69□□□□□ -0.22
USB1-201ENST00000219281 CRXO43186 299 aaPredicted RBP13.69□□□□□ -0.22
USB1-201ENST00000219281 PLGLAQ15195 96 aa13.69□□□□□ -0.22
USB1-201ENST00000219281 ORAOV1Q8WV07 137 aa13.69□□□□□ -0.22
USB1-201ENST00000219281 NDFIP1Q9BT67 221 aa13.69□□□□□ -0.22
USB1-201ENST00000219281 HAX1O00165 279 aa13.69□□□□□ -0.22
USB1-201ENST00000219281 MUC15Q8N387 334 aa13.69□□□□□ -0.22
USB1-201ENST00000219281 C17orf77Q96MU5 243 aa13.69□□□□□ -0.22
USB1-201ENST00000219281 hDV102S1A0JD36 115 aa13.68□□□□□ -0.22
USB1-201ENST00000219281 APOHP02749 345 aaPredicted RBP13.68□□□□□ -0.22
USB1-201ENST00000219281 RPEQ96AT9 228 aa13.68□□□□□ -0.22
USB1-201ENST00000219281 ATRXP46100 2492 aa13.68□□□□□ -0.22
USB1-201ENST00000219281 PPP1R14DQ9NXH3 145 aa13.67□□□□□ -0.22
USB1-201ENST00000219281 NBASA2RRP1 2371 aa13.67□□□□□ -0.22
USB1-201ENST00000219281 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.67□□□□□ -0.22
USB1-201ENST00000219281 ZNF785A8K8V0 405 aa13.67□□□□□ -0.22
USB1-201ENST00000219281 IGKV1-17P01599 117 aa13.67□□□□□ -0.22
USB1-201ENST00000219281 HOXB4P17483 251 aaPredicted RBP13.67□□□□□ -0.22
USB1-201ENST00000219281 ZC2HC1AQ96GY0 325 aa13.67□□□□□ -0.22
USB1-201ENST00000219281 NGBQ9NPG2 151 aa13.67□□□□□ -0.22
USB1-201ENST00000219281 C1RLQ9NZP8 487 aa13.67□□□□□ -0.22
USB1-201ENST00000219281 OVOL3O00110 214 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 CCL25O15444 150 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 CSN3P07498 182 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 C16orf54Q6UWD8 224 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 COX11Q9Y6N1 276 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 TRBV19A0A075B6N1 114 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 CNIH1O95406 144 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 HTR1DP28221 377 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 APOBEC3AP31941 199 aaPredicted RBP13.66□□□□□ -0.22
USB1-201ENST00000219281 PTTG1IPP53801 180 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 MCRIP2Q9BUT9 160 aaKnown RBP13.66□□□□□ -0.22
USB1-201ENST00000219281 TMUB1Q9BVT8 246 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 ST20Q9HBF5 79 aa13.66□□□□□ -0.22
USB1-201ENST00000219281 PPIAL4CA0A0B4J2A2 164 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 PPIAL4GP0DN37 164 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 ZNF738Q8NE65 137 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 SHANK2-AS3Q9BTD1 123 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 TIMM8BQ9Y5J9 83 aaPredicted RBP13.65□□□□□ -0.22
USB1-201ENST00000219281 MALRD1Q5VYJ5 2156 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 H0Y8G0 127 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 LIPFP07098 398 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 ARMS2P0C7Q2 107 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 BPIFA4PQ86YQ2 179 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 LINC01560Q8TB33 94 aa13.65□□□□□ -0.22
USB1-201ENST00000219281 A0A1B0GUT8 65 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 K7EIM0 57 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 GRNP28799 593 aaKnown RBP13.64□□□□□ -0.23
USB1-201ENST00000219281 MAP1LC3CQ9BXW4 147 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 TMEM191AQ9H0A3 160 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 TRBV6-1A0A0K0K1D8 114 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 B9A039 149 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 H3BRN7 92 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 OR5AL1P0C617 328 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 SFTPCP11686 197 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 UCNP55089 124 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 TMEM75Q8N9X5 138 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 PSG8Q9UQ74 426 aa13.64□□□□□ -0.23
USB1-201ENST00000219281 ABCA1O95477 2261 aa13.63□□□□□ -0.23
USB1-201ENST00000219281 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.63□□□□□ -0.23
USB1-201ENST00000219281 CDSNQ15517 529 aa13.63□□□□□ -0.23
USB1-201ENST00000219281 SIGLEC15Q6ZMC9 328 aa13.63□□□□□ -0.23
USB1-201ENST00000219281 LY6LH3BQJ8 138 aa13.62□□□□□ -0.23
USB1-201ENST00000219281 TIMM23O14925 209 aa13.62□□□□□ -0.23
USB1-201ENST00000219281 IGFBPL1Q8WX77 278 aa13.62□□□□□ -0.23
USB1-201ENST00000219281 ONECUT1Q9UBC0 465 aa13.62□□□□□ -0.23
USB1-201ENST00000219281 S4R3C0 116 aa13.62□□□□□ -0.23
USB1-201ENST00000219281 HLA-DRB1P01911 266 aa13.62□□□□□ -0.23
USB1-201ENST00000219281 IL4P05112 153 aa13.62□□□□□ -0.23
USB1-201ENST00000219281 CD3EP07766 207 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms