RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 FAM74A1Q5RGS3 127 aa10.97□□□□□ -0.65
UPK3A-201ENST00000216211 RPP25LQ8N5L8 163 aaKnown RBP10.97□□□□□ -0.65
UPK3A-201ENST00000216211 PCNPQ8WW12 178 aaKnown RBP10.97□□□□□ -0.65
UPK3A-201ENST00000216211 ATP5SQ99766 215 aa10.97□□□□□ -0.65
UPK3A-201ENST00000216211 C11orf68Q9H3H3 251 aaKnown RBP10.97□□□□□ -0.65
UPK3A-201ENST00000216211 STRAPQ9Y3F4 350 aaKnown RBP10.97□□□□□ -0.65
UPK3A-201ENST00000216211 VPS13DQ5THJ4 4388 aa10.97□□□□□ -0.65
UPK3A-201ENST00000216211 TRAV2A0A0B4J234 112 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 PMS2P5A8MQ11 134 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 DEFB4AO15263 64 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 METTL15P1P0C7V9 234 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 SPP1P10451 314 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 SULT1A2P50226 295 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 HBG1P69891 147 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 HBG2P69892 147 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 ARL16Q0P5N6 197 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 CLINT1Q14677 625 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 ATP6V1FQ16864 119 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 STXBP6Q8NFX7 210 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 OR4X1Q8NH49 305 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 C11orf45Q8TAV5 145 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 TMEM231Q9H6L2 316 aa10.96□□□□□ -0.65
UPK3A-201ENST00000216211 HECTD4Q9Y4D8 3996 aa10.96□□□□□ -0.66
UPK3A-201ENST00000216211 RPP30P78346 268 aaKnown RBP10.95□□□□□ -0.66
UPK3A-201ENST00000216211 BSXQ3C1V8 233 aa10.95□□□□□ -0.66
UPK3A-201ENST00000216211 TIGITQ495A1 244 aa10.95□□□□□ -0.66
UPK3A-201ENST00000216211 COMMD7Q86VX2 200 aa10.95□□□□□ -0.66
UPK3A-201ENST00000216211 STHQ8IWL8 128 aa10.95□□□□□ -0.66
UPK3A-201ENST00000216211 SAT2Q96F10 170 aaPredicted RBP10.95□□□□□ -0.66
UPK3A-201ENST00000216211 METTL26Q96S19 204 aa10.95□□□□□ -0.66
UPK3A-201ENST00000216211 PARD6GQ9BYG4 376 aaPredicted RBP10.95□□□□□ -0.66
UPK3A-201ENST00000216211 PLA2G2EQ9NZK7 142 aa10.95□□□□□ -0.66
UPK3A-201ENST00000216211 A0A1W2PS18 150 aa10.94□□□□□ -0.66
UPK3A-201ENST00000216211 K7EQG2 157 aa10.94□□□□□ -0.66
UPK3A-201ENST00000216211 IFNA5P01569 189 aa10.94□□□□□ -0.66
UPK3A-201ENST00000216211 CRYBB3P26998 211 aa10.94□□□□□ -0.66
UPK3A-201ENST00000216211 GNPNAT1Q96EK6 184 aaPredicted RBP10.94□□□□□ -0.66
UPK3A-201ENST00000216211 PFDN2Q9UHV9 154 aa10.94□□□□□ -0.66
UPK3A-201ENST00000216211 SCGB2A1O75556 95 aa10.93□□□□□ -0.66
UPK3A-201ENST00000216211 IGKV1-17P01599 117 aa10.93□□□□□ -0.66
UPK3A-201ENST00000216211 ZNF688P0C7X2 276 aa10.93□□□□□ -0.66
UPK3A-201ENST00000216211 ATP6V0CP27449 155 aa10.93□□□□□ -0.66
UPK3A-201ENST00000216211 RAB5CP51148 216 aa10.93□□□□□ -0.66
UPK3A-201ENST00000216211 SLC38A11Q08AI6 406 aa10.93□□□□□ -0.66
UPK3A-201ENST00000216211 LGALS9CQ6DKI2 356 aa10.93□□□□□ -0.66
UPK3A-201ENST00000216211 OR10P1Q8NGE3 313 aa10.93□□□□□ -0.66
UPK3A-201ENST00000216211 HEYLQ9NQ87 328 aaPredicted RBP10.93□□□□□ -0.66
UPK3A-201ENST00000216211 TRAV30A0A087WSZ9 112 aa10.92□□□□□ -0.66
UPK3A-201ENST00000216211 KNCNA6PVL3 124 aa10.92□□□□□ -0.66
UPK3A-201ENST00000216211 IFNA4P05014 189 aa10.92□□□□□ -0.66
UPK3A-201ENST00000216211 ATP5IP56385 69 aaPredicted RBP10.92□□□□□ -0.66
UPK3A-201ENST00000216211 BLOC1S1P78537 153 aa10.92□□□□□ -0.66
UPK3A-201ENST00000216211 VWC2Q2TAL6 325 aa10.92□□□□□ -0.66
UPK3A-201ENST00000216211 TRPT1Q86TN4 253 aaKnown RBP10.92□□□□□ -0.66
UPK3A-201ENST00000216211 EIF4E3Q8N5X7 224 aaKnown RBP10.92□□□□□ -0.66
UPK3A-201ENST00000216211 HSD17B11Q8NBQ5 300 aa10.92□□□□□ -0.66
UPK3A-201ENST00000216211 NARS2Q96I59 477 aaKnown RBP10.92□□□□□ -0.66
UPK3A-201ENST00000216211 ZNF705EA8MWA4 302 aaPredicted RBP10.91□□□□□ -0.66
UPK3A-201ENST00000216211 GIG44P09565 113 aaPredicted RBP10.91□□□□□ -0.66
UPK3A-201ENST00000216211 IGLC1P0CG04 106 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 RND2P52198 227 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 C2orf83Q53S99 150 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 Q8NAQ8 132 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 SCGB1C1Q8TD33 95 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 DCANP1Q8TF63 244 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 GRAMD2BQ96HH9 432 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 TMEM147Q9BVK8 224 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 GGACTQ9BVM4 153 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 SH3BGRL3Q9H299 93 aa10.91□□□□□ -0.66
UPK3A-201ENST00000216211 UMAD1C9J7I0 102 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 IFNA10P01566 189 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 OR10J1P30954 320 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 RAB11AP62491 216 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 OR8G2PQ6IF36 304 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 SLC24A4Q8NFF2 622 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 OR2G3Q8NGZ4 309 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 C2CD4CQ8TF44 421 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 TMEM170AQ8WVE7 144 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 PSMG3Q9BT73 122 aaPredicted RBP10.9□□□□□ -0.66
UPK3A-201ENST00000216211 WDR61Q9GZS3 305 aaKnown RBP10.9□□□□□ -0.66
UPK3A-201ENST00000216211 U3KQE9 123 aa10.9□□□□□ -0.66
UPK3A-201ENST00000216211 IGHV4-28A0A0C4DH34 117 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 PRSS46E5RG02 174 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 RBMY1A1P0DJD3 496 aaKnown RBP10.89□□□□□ -0.67
UPK3A-201ENST00000216211 RBMY1CP0DJD4 496 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 RBMY1FQ15415 496 aaKnown RBP10.89□□□□□ -0.67
UPK3A-201ENST00000216211 ACTL10Q5JWF8 245 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
UPK3A-201ENST00000216211 C16orf54Q6UWD8 224 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 LYPD6BQ8NI32 183 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 RNASEH2CQ8TDP1 164 aaKnown RBP10.89□□□□□ -0.67
UPK3A-201ENST00000216211 Q8WTZ3 238 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 UQCC1Q9NVA1 299 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 CLEC5AQ9NY25 188 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
UPK3A-201ENST00000216211 IL4P05112 153 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 NPY1RP25929 384 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 YPEL3P61236 119 aaPredicted RBP10.88□□□□□ -0.67
UPK3A-201ENST00000216211 DLK1P80370 383 aa10.88□□□□□ -0.67
UPK3A-201ENST00000216211 USF2Q15853 346 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms