RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W UGP1P32861 499 aaKnown RBP1.2□□□□□ -2.22
SEC8YPR055W PAC2P39937 518 aa1.2□□□□□ -2.22
SEC8YPR055W PEX14P53112 341 aa1.2□□□□□ -2.22
SEC8YPR055W YGL117WP53133 265 aa1.2□□□□□ -2.22
SEC8YPR055W ARR3Q06598 404 aa1.2□□□□□ -2.22
SEC8YPR055W APM4Q99186 491 aa1.2□□□□□ -2.22
SEC8YPR055W AI5_ALPHAQ9ZZX1 630 aa1.2□□□□□ -2.22
SEC8YPR055W RPN13O13563 156 aa1.19□□□□□ -2.22
SEC8YPR055W KAR1P11927 433 aa1.19□□□□□ -2.22
SEC8YPR055W RNR3P21672 869 aaKnown RBP1.19□□□□□ -2.22
SEC8YPR055W VPS34P22543 875 aa1.19□□□□□ -2.22
SEC8YPR055W XBP1P40489 647 aa1.19□□□□□ -2.22
SEC8YPR055W IRC5P43610 853 aa1.19□□□□□ -2.22
SEC8YPR055W YJL043WP47053 257 aa1.19□□□□□ -2.22
SEC8YPR055W MNT2P53059 558 aa1.19□□□□□ -2.22
SEC8YPR055W BMS1Q08965 1183 aaKnown RBP1.19□□□□□ -2.22
SEC8YPR055W NUR1Q12066 484 aa1.19□□□□□ -2.22
SEC8YPR055W FRE7Q12333 620 aa1.19□□□□□ -2.22
SEC8YPR055W MPD2Q99316 277 aa1.19□□□□□ -2.22
SEC8YPR055W URA3P03962 267 aa1.19□□□□□ -2.22
SEC8YPR055W AQY1P0CD91 305 aa1.19□□□□□ -2.22
SEC8YPR055W CNE1P27825 502 aa1.19□□□□□ -2.22
SEC8YPR055W HEM12P32347 362 aaPredicted RBP1.19□□□□□ -2.22
SEC8YPR055W LRO1P40345 661 aa1.19□□□□□ -2.22
SEC8YPR055W YIL092WP40497 633 aa1.19□□□□□ -2.22
SEC8YPR055W YNL034WP53963 612 aa1.19□□□□□ -2.22
SEC8YPR055W YNL018CP53976 612 aa1.19□□□□□ -2.22
SEC8YPR055W DOS2P54858 310 aa1.19□□□□□ -2.22
SEC8YPR055W RPS15Q01855 142 aaKnown RBP1.19□□□□□ -2.22
SEC8YPR055W MTD1Q02046 320 aaKnown RBP1.19□□□□□ -2.22
SEC8YPR055W YML119WQ03208 357 aa1.19□□□□□ -2.22
SEC8YPR055W NSE5Q03718 556 aa1.19□□□□□ -2.22
SEC8YPR055W RIM13Q03792 727 aa1.19□□□□□ -2.22
SEC8YPR055W PCL8Q08966 492 aa1.19□□□□□ -2.22
SEC8YPR055W NDJ1Q12366 352 aa1.19□□□□□ -2.22
SEC8YPR055W ZPS1Q12512 249 aa1.19□□□□□ -2.22
SEC8YPR055W LEU2P04173 364 aaPredicted RBP1.18□□□□□ -2.22
SEC8YPR055W ACO1P19414 778 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
SEC8YPR055W ORC2P32833 620 aa1.18□□□□□ -2.22
SEC8YPR055W YFL015CP43578 164 aa1.18□□□□□ -2.22
SEC8YPR055W DUG1P43616 481 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W SND1Q04007 877 aa1.18□□□□□ -2.22
SEC8YPR055W PHM6Q05637 104 aa1.18□□□□□ -2.22
SEC8YPR055W YNL162W-AQ3E7A8 72 aa1.18□□□□□ -2.22
SEC8YPR055W CPA2P03965 1118 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W YPT10P38146 199 aa1.18□□□□□ -2.22
SEC8YPR055W YJL193WP39542 402 aa1.18□□□□□ -2.22
SEC8YPR055W SCS2P40075 244 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W THI6P41835 540 aa1.18□□□□□ -2.22
SEC8YPR055W SAP4P53036 818 aa1.18□□□□□ -2.22
SEC8YPR055W SLD3P53135 668 aa1.18□□□□□ -2.22
SEC8YPR055W YNR071CP53757 342 aa1.18□□□□□ -2.22
SEC8YPR055W ACS1Q01574 713 aa1.18□□□□□ -2.22
SEC8YPR055W PRS5Q12265 496 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W HOP1P20050 605 aa1.18□□□□□ -2.22
SEC8YPR055W BET2P20133 325 aa1.18□□□□□ -2.22
SEC8YPR055W VPS33P20795 691 aa1.18□□□□□ -2.22
SEC8YPR055W RPS7AP26786 190 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W PRE2P30656 287 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W DSS4P32601 143 aa1.18□□□□□ -2.22
SEC8YPR055W HOT13P36078 116 aa1.18□□□□□ -2.22
SEC8YPR055W SRP68P38687 599 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W MAD2P40958 196 aa1.18□□□□□ -2.22
SEC8YPR055W CPR8P53728 308 aa1.18□□□□□ -2.22
SEC8YPR055W DAK1P54838 584 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W SLK19Q08581 821 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W DIN7Q12086 430 aa1.18□□□□□ -2.22
SEC8YPR055W DBP10Q12389 995 aaKnown RBP1.18□□□□□ -2.22
SEC8YPR055W SSB1P11484 613 aaKnown RBP1.17□□□□□ -2.22
SEC8YPR055W CBP3P21560 335 aa1.17□□□□□ -2.22
SEC8YPR055W MRPL9P31334 269 aa1.17□□□□□ -2.22
SEC8YPR055W GDA1P32621 518 aa1.17□□□□□ -2.22
SEC8YPR055W DHR2P36009 735 aaPredicted RBP1.17□□□□□ -2.22
SEC8YPR055W PIH1P38768 344 aa1.17□□□□□ -2.22
SEC8YPR055W MTG2P38860 518 aa1.17□□□□□ -2.22
SEC8YPR055W SSB2P40150 613 aaKnown RBP1.17□□□□□ -2.22
SEC8YPR055W MRK1P50873 501 aa1.17□□□□□ -2.22
SEC8YPR055W COS12P53053 380 aa1.17□□□□□ -2.22
SEC8YPR055W PEF1P53238 335 aa1.17□□□□□ -2.22
SEC8YPR055W ATP23P53722 227 aa1.17□□□□□ -2.22
SEC8YPR055W UBP16Q02863 499 aa1.17□□□□□ -2.22
SEC8YPR055W WAR1Q03631 944 aa1.17□□□□□ -2.22
SEC8YPR055W YML053CQ04978 212 aa1.17□□□□□ -2.22
SEC8YPR055W AIM44Q99299 758 aa1.17□□□□□ -2.22
SEC8YPR055W RPL7AP05737 244 aaKnown RBP1.17□□□□□ -2.22
SEC8YPR055W ADH4P10127 382 aa1.17□□□□□ -2.22
SEC8YPR055W APN1P22936 367 aa1.17□□□□□ -2.22
SEC8YPR055W EXO1P39875 702 aa1.17□□□□□ -2.22
SEC8YPR055W STL1P39932 569 aa1.17□□□□□ -2.22
SEC8YPR055W IMA5P40884 581 aa1.17□□□□□ -2.22
SEC8YPR055W COQ6P53318 479 aa1.17□□□□□ -2.22
SEC8YPR055W MOT3P54785 490 aaKnown RBP1.17□□□□□ -2.22
SEC8YPR055W RPL7BQ12213 244 aaKnown RBP1.17□□□□□ -2.22
SEC8YPR055W HOS1Q12214 470 aa1.17□□□□□ -2.22
SEC8YPR055W HEM1P09950 548 aaPredicted RBP1.16□□□□□ -2.22
SEC8YPR055W SEC12P11655 471 aa1.16□□□□□ -2.22
SEC8YPR055W PMA2P19657 947 aa1.16□□□□□ -2.22
SEC8YPR055W PHO3P24031 467 aa1.16□□□□□ -2.22
SEC8YPR055W ARO9P38840 513 aaPredicted RBP1.16□□□□□ -2.22
SEC8YPR055W YNL092WP53934 400 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms