RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C AAC3P18238 307 aa3.33□□□□□ -1.88
SSN8YNL025C HCA4P20448 770 aaKnown RBP3.33□□□□□ -1.88
SSN8YNL025C DAL7P21826 554 aa3.33□□□□□ -1.88
SSN8YNL025C MCM3P24279 971 aaKnown RBP3.33□□□□□ -1.88
SSN8YNL025C MNE1P24720 663 aa3.33□□□□□ -1.88
SSN8YNL025C NPP1P25353 742 aa3.33□□□□□ -1.88
SSN8YNL025C RPC53P25441 422 aa3.33□□□□□ -1.88
SSN8YNL025C SPB1P25582 841 aaPredicted RBP3.33□□□□□ -1.88
SSN8YNL025C HOG1P32485 435 aa3.33□□□□□ -1.88
SSN8YNL025C SSE1P32589 693 aaKnown RBP3.33□□□□□ -1.88
SSN8YNL025C AFR1P33304 620 aa3.33□□□□□ -1.88
SSN8YNL025C CTF13P35203 478 aa3.33□□□□□ -1.88
SSN8YNL025C RMA1P36001 430 aaKnown RBP3.33□□□□□ -1.88
SSN8YNL025C TDA3P38758 523 aa3.33□□□□□ -1.88
SSN8YNL025C YHR131CP38835 850 aa3.33□□□□□ -1.88
SSN8YNL025C YEL068CP39977 110 aa3.33□□□□□ -1.88
SSN8YNL025C RIC1P40395 1056 aa3.33□□□□□ -1.88
SSN8YNL025C MAD3P47074 515 aa3.33□□□□□ -1.88
SSN8YNL025C BNA2P47125 453 aa3.33□□□□□ -1.88
SSN8YNL025C CCM1P48237 864 aaPredicted RBP3.33□□□□□ -1.88
SSN8YNL025C STB4P50104 949 aa3.33□□□□□ -1.88
SSN8YNL025C LCD1Q04377 747 aa3.33□□□□□ -1.88
SSN8YNL025C ATG33Q06485 197 aa3.33□□□□□ -1.88
SSN8YNL025C ARP7Q12406 477 aa3.33□□□□□ -1.88
SSN8YNL025C FUM1P08417 488 aaKnown RBP3.32□□□□□ -1.88
SSN8YNL025C MSD1P15179 658 aaKnown RBP3.32□□□□□ -1.88
SSN8YNL025C DAL80P26343 269 aa3.32□□□□□ -1.88
SSN8YNL025C SEC21P32074 935 aaKnown RBP3.32□□□□□ -1.88
SSN8YNL025C DPH2P32461 534 aa3.32□□□□□ -1.88
SSN8YNL025C MTH1P35198 433 aa3.32□□□□□ -1.88
SSN8YNL025C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SSN8YNL025C CTF8P38877 133 aa3.32□□□□□ -1.88
SSN8YNL025C TPA1P40032 644 aaKnown RBP3.32□□□□□ -1.88
SSN8YNL025C YJL068CP40363 299 aa3.32□□□□□ -1.88
SSN8YNL025C SEC28P40509 296 aaKnown RBP3.32□□□□□ -1.88
SSN8YNL025C CCT7P42943 550 aaKnown RBP3.32□□□□□ -1.88
SSN8YNL025C GYP8P43570 497 aa3.32□□□□□ -1.88
SSN8YNL025C NIT3P49954 291 aa3.32□□□□□ -1.88
SSN8YNL025C PCL10P53124 433 aa3.32□□□□□ -1.88
SSN8YNL025C YAP1802P53309 568 aa3.32□□□□□ -1.88
SSN8YNL025C OGG1P53397 376 aaPredicted RBP3.32□□□□□ -1.88
SSN8YNL025C CBK1P53894 756 aa3.32□□□□□ -1.88
SSN8YNL025C EOS1P53938 366 aa3.32□□□□□ -1.88
SSN8YNL025C ECM9Q02202 377 aa3.32□□□□□ -1.88
SSN8YNL025C PEX25Q02969 394 aa3.32□□□□□ -1.88
SSN8YNL025C ATP25Q03153 612 aa3.32□□□□□ -1.88
SSN8YNL025C YDR514CQ04408 483 aa3.32□□□□□ -1.88
SSN8YNL025C UTP21Q06078 939 aaPredicted RBP3.32□□□□□ -1.88
SSN8YNL025C RSC3Q06639 885 aa3.32□□□□□ -1.88
SSN8YNL025C PEX19Q07418 342 aa3.32□□□□□ -1.88
SSN8YNL025C REX3Q12090 404 aa3.32□□□□□ -1.88
SSN8YNL025C ZRT2Q12436 422 aa3.32□□□□□ -1.88
SSN8YNL025C TRM11Q12463 433 aa3.32□□□□□ -1.88
SSN8YNL025C GCN4P03069 281 aa3.31□□□□□ -1.88
SSN8YNL025C VAS1P07806 1104 aaKnown RBP3.31□□□□□ -1.88
SSN8YNL025C MET3P08536 511 aa3.31□□□□□ -1.88
SSN8YNL025C CDC16P09798 840 aa3.31□□□□□ -1.88
SSN8YNL025C MTF2P10849 440 aa3.31□□□□□ -1.88
SSN8YNL025C NTG1P31378 399 aa3.31□□□□□ -1.88
SSN8YNL025C DAL3P32459 195 aa3.31□□□□□ -1.88
SSN8YNL025C REC104P33323 182 aa3.31□□□□□ -1.88
SSN8YNL025C UIP5P36137 443 aa3.31□□□□□ -1.88
SSN8YNL025C TAF5P38129 798 aa3.31□□□□□ -1.88
SSN8YNL025C YLF2P38746 405 aa3.31□□□□□ -1.88
SSN8YNL025C VPS45P38932 577 aa3.31□□□□□ -1.88
SSN8YNL025C ATF1P40353 525 aa3.31□□□□□ -1.88
SSN8YNL025C RMD8P43620 662 aa3.31□□□□□ -1.88
SSN8YNL025C MNP1P53163 194 aaPredicted RBP3.31□□□□□ -1.88
SSN8YNL025C JJJ1P53863 590 aa3.31□□□□□ -1.88
SSN8YNL025C ADA2Q02336 434 aa3.31□□□□□ -1.88
SSN8YNL025C VTC3Q02725 835 aa3.31□□□□□ -1.88
SSN8YNL025C YPL071CQ02864 156 aa3.31□□□□□ -1.88
SSN8YNL025C YMR155WQ03795 547 aa3.31□□□□□ -1.88
SSN8YNL025C NHX1Q04121 633 aa3.31□□□□□ -1.88
SSN8YNL025C HLR1Q04429 423 aa3.31□□□□□ -1.88
SSN8YNL025C DPB4Q04603 196 aaKnown RBP3.31□□□□□ -1.88
SSN8YNL025C SSL1Q04673 461 aaPredicted RBP3.31□□□□□ -1.88
SSN8YNL025C CIA1Q05583 330 aa3.31□□□□□ -1.88
SSN8YNL025C YRM1Q12340 786 aa3.31□□□□□ -1.88
SSN8YNL025C TUF1P02992 437 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C ILS1P09436 1072 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C MIS1P09440 975 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C HOM2P13663 365 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C POL3P15436 1097 aa3.3□□□□□ -1.88
SSN8YNL025C MET8P15807 274 aa3.3□□□□□ -1.88
SSN8YNL025C STE50P25344 346 aa3.3□□□□□ -1.88
SSN8YNL025C YCL049CP25577 312 aa3.3□□□□□ -1.88
SSN8YNL025C PUP2P32379 260 aa3.3□□□□□ -1.88
SSN8YNL025C TYE7P33122 291 aaPredicted RBP3.3□□□□□ -1.88
SSN8YNL025C SER1P33330 395 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C SWH1P35845 1188 aa3.3□□□□□ -1.88
SSN8YNL025C YRO2P38079 344 aa3.3□□□□□ -1.88
SSN8YNL025C APM3P38153 483 aa3.3□□□□□ -1.88
SSN8YNL025C YBR225WP38321 900 aa3.3□□□□□ -1.88
SSN8YNL025C SMC2P38989 1170 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C STL1P39932 569 aa3.3□□□□□ -1.88
SSN8YNL025C YER010CP40011 234 aa3.3□□□□□ -1.88
SSN8YNL025C LSM5P40089 93 aaKnown RBP3.3□□□□□ -1.88
SSN8YNL025C TOK1P40310 691 aa3.3□□□□□ -1.88
SSN8YNL025C PSF2P40359 213 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms