RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C PPE1P38796 400 aa2.52□□□□□ -2.01
SGD1YLR336C SSP120P39931 234 aaKnown RBP2.52□□□□□ -2.01
SGD1YLR336C RPT2P40327 437 aaKnown RBP2.52□□□□□ -2.01
SGD1YLR336C CTR1P49573 406 aa2.52□□□□□ -2.01
SGD1YLR336C UBX4P54730 416 aa2.52□□□□□ -2.01
SGD1YLR336C EFR3Q03653 782 aaKnown RBP2.52□□□□□ -2.01
SGD1YLR336C TMN2Q04562 672 aa2.52□□□□□ -2.01
SGD1YLR336C HIM1Q06674 414 aa2.52□□□□□ -2.01
SGD1YLR336C RKI1Q12189 258 aa2.52□□□□□ -2.01
SGD1YLR336C HOS1Q12214 470 aa2.52□□□□□ -2.01
SGD1YLR336C PGI1P12709 554 aaKnown RBP2.51□□□□□ -2.01
SGD1YLR336C SEC18P18759 758 aaKnown RBP2.51□□□□□ -2.01
SGD1YLR336C VPS33P20795 691 aa2.51□□□□□ -2.01
SGD1YLR336C SDS22P36047 338 aa2.51□□□□□ -2.01
SGD1YLR336C YEL025CP39991 1188 aa2.51□□□□□ -2.01
SGD1YLR336C ARG2P40360 574 aa2.51□□□□□ -2.01
SGD1YLR336C GND2P53319 492 aa2.51□□□□□ -2.01
SGD1YLR336C YSH1Q06224 779 aaPredicted RBP2.51□□□□□ -2.01
SGD1YLR336C HBT1Q07653 1046 aaKnown RBP2.51□□□□□ -2.01
SGD1YLR336C LAM4P38800 1345 aa2.51□□□□□ -2.01
SGD1YLR336C ABF1P14164 731 aa2.51□□□□□ -2.01
SGD1YLR336C MTH1P35198 433 aa2.51□□□□□ -2.01
SGD1YLR336C OAR1P35731 278 aa2.51□□□□□ -2.01
SGD1YLR336C RIM4P38741 713 aa2.51□□□□□ -2.01
SGD1YLR336C IES5P40060 125 aa2.51□□□□□ -2.01
SGD1YLR336C GSM1P42950 618 aa2.51□□□□□ -2.01
SGD1YLR336C UBA2P52488 636 aa2.51□□□□□ -2.01
SGD1YLR336C MRH1Q12117 320 aaPredicted RBP2.51□□□□□ -2.01
SGD1YLR336C TUF1P02992 437 aaKnown RBP2.5□□□□□ -2.01
SGD1YLR336C STE4P18851 423 aa2.5□□□□□ -2.01
SGD1YLR336C GLG1P36143 616 aa2.5□□□□□ -2.01
SGD1YLR336C APL3P38065 1025 aa2.5□□□□□ -2.01
SGD1YLR336C FUI1P38196 639 aa2.5□□□□□ -2.01
SGD1YLR336C YJL206CP39529 758 aa2.5□□□□□ -2.01
SGD1YLR336C YJL193WP39542 402 aa2.5□□□□□ -2.01
SGD1YLR336C TRI1Q05024 226 aa2.5□□□□□ -2.01
SGD1YLR336C TAF3Q12297 353 aa2.5□□□□□ -2.01
SGD1YLR336C GMH1P36125 273 aa2.5□□□□□ -2.01
SGD1YLR336C STT3P39007 718 aaKnown RBP2.5□□□□□ -2.01
SGD1YLR336C SPC72P39723 622 aa2.5□□□□□ -2.01
SGD1YLR336C COS12P53053 380 aa2.5□□□□□ -2.01
SGD1YLR336C TAN1P53072 289 aaPredicted RBP2.5□□□□□ -2.01
SGD1YLR336C TIM44Q01852 431 aa2.5□□□□□ -2.01
SGD1YLR336C UFO1Q04511 668 aa2.5□□□□□ -2.01
SGD1YLR336C CIA1Q05583 330 aa2.5□□□□□ -2.01
SGD1YLR336C APM3P38153 483 aa2.49□□□□□ -2.01
SGD1YLR336C MIT1P40002 666 aa2.49□□□□□ -2.01
SGD1YLR336C POL31P46957 487 aa2.49□□□□□ -2.01
SGD1YLR336C SPC98P53540 846 aa2.49□□□□□ -2.01
SGD1YLR336C RPS15Q01855 142 aaKnown RBP2.49□□□□□ -2.01
SGD1YLR336C TRS23Q03784 219 aa2.49□□□□□ -2.01
SGD1YLR336C HOF1Q05080 669 aa2.49□□□□□ -2.01
SGD1YLR336C DSS4P32601 143 aa2.49□□□□□ -2.01
SGD1YLR336C EMP70P32802 667 aa2.49□□□□□ -2.01
SGD1YLR336C VPS24P36095 224 aaKnown RBP2.49□□□□□ -2.01
SGD1YLR336C YMC2P38087 329 aa2.49□□□□□ -2.01
SGD1YLR336C TAF5P38129 798 aa2.49□□□□□ -2.01
SGD1YLR336C BDH2P39713 417 aa2.49□□□□□ -2.01
SGD1YLR336C PMT6P42934 759 aa2.49□□□□□ -2.01
SGD1YLR336C YIP4P53093 235 aa2.49□□□□□ -2.01
SGD1YLR336C USA1Q03714 838 aa2.49□□□□□ -2.01
SGD1YLR336C SUT2Q12286 268 aa2.49□□□□□ -2.01
SGD1YLR336C KIN3P22209 435 aa2.48□□□□□ -2.01
SGD1YLR336C MSH1P25846 959 aa2.48□□□□□ -2.01
SGD1YLR336C PRE2P30656 287 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C DBF20P32328 564 aa2.48□□□□□ -2.01
SGD1YLR336C DHR2P36009 735 aaPredicted RBP2.48□□□□□ -2.01
SGD1YLR336C YLF2P38746 405 aa2.48□□□□□ -2.01
SGD1YLR336C ACA1P39970 489 aa2.48□□□□□ -2.01
SGD1YLR336C ERR3P42222 437 aa2.48□□□□□ -2.01
SGD1YLR336C MFM1Q02783 413 aa2.48□□□□□ -2.01
SGD1YLR336C ATG16Q03818 150 aa2.48□□□□□ -2.01
SGD1YLR336C EIS1Q05050 843 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C ENT2Q05785 613 aa2.48□□□□□ -2.01
SGD1YLR336C AAD4Q07747 329 aa2.48□□□□□ -2.01
SGD1YLR336C BMS1Q08965 1183 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C PHO5P00635 467 aa2.48□□□□□ -2.01
SGD1YLR336C SEC12P11655 471 aa2.48□□□□□ -2.01
SGD1YLR336C PWP2P25635 923 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C CNE1P27825 502 aa2.48□□□□□ -2.01
SGD1YLR336C CAP1P28495 268 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C FRD1P32614 470 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C YPT10P38146 199 aa2.48□□□□□ -2.01
SGD1YLR336C BUD17P53727 317 aa2.48□□□□□ -2.01
SGD1YLR336C TRS31Q03337 283 aa2.48□□□□□ -2.01
SGD1YLR336C CEF1Q03654 590 aaPredicted RBP2.48□□□□□ -2.01
SGD1YLR336C YDR179W-AQ03983 463 aa2.48□□□□□ -2.01
SGD1YLR336C ICL2Q12031 575 aa2.48□□□□□ -2.01
SGD1YLR336C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SGD1YLR336C POL3P15436 1097 aa2.48□□□□□ -2.01
SGD1YLR336C MCM3P24279 971 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C SWI4P25302 1093 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C RPS7AP26786 190 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C VFA1P40080 203 aa2.48□□□□□ -2.01
SGD1YLR336C VPS73P53142 486 aaKnown RBP2.48□□□□□ -2.01
SGD1YLR336C SIR1P21691 654 aa2.47□□□□□ -2.01
SGD1YLR336C PRP45P28004 379 aaPredicted RBP2.47□□□□□ -2.01
SGD1YLR336C YGR021WP53212 290 aa2.47□□□□□ -2.01
SGD1YLR336C CRD1Q07560 283 aa2.47□□□□□ -2.01
SGD1YLR336C IRC10Q08118 586 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms