RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	TDH1	P00360	332 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	VAS1	P07806	1104 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	GPA2	P10823	449 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	PHO8	P11491	566 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	KIN3	P22209	435 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	URE2	P23202	354 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	RVS161	P25343	265 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	RPS7A	P26786	190 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	ASH1	P34233	588 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	PHO11	P35842	467 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	YBR138C	P38277	524 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	PHO12	P38693	467 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	BCD1	P38772	366 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	SEC31	P38968	1273 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	YIL161W	P40449	235 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	BNA3	P47039	444 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	PAN2	P53010	1115 aa	Predicted RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	SPC105	P53148	917 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	LIF1	P53150	421 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	CWC25	P53854	179 aa	Known RBP	4.24	□□□□□ -1.73
YSH1	YLR277C	CIK1	Q01649	594 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	KAP120	Q02932	1032 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	YML131W	Q03102	365 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	IES3	Q12345	250 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	IRC20	Q06554	1556 aa		4.24	□□□□□ -1.73
YSH1	YLR277C	PRB1	P09232	635 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	KIN2	P13186	1147 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	KTR2	P33550	425 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	PIK1	P39104	1066 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	SSO2	P39926	295 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	STB2	P46679	850 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	CTK3	P46963	296 aa	Predicted RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	RAI1	P53063	387 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	KAP114	P53067	1004 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	YNR029C	P53729	429 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	ALD6	P54115	500 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	FOX2	Q02207	900 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	TIM50	Q02776	476 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	YMR010W	Q03687	405 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	PDS5	Q04264	1277 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	YDR514C	Q04408	483 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	ECM38	Q05902	660 aa	Predicted RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	PDR8	Q06149	701 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	THI3	Q07471	609 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	YLL007C	Q07799	665 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	TY3A-G	Q12173	290 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	NYV1	Q12255	253 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	HMS1	Q12398	434 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	TY3A-I	Q99219	290 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	ARG80	P07249	177 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	SES1	P07284	462 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	RPS24A	P0CX31	135 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	RPS24B	P0CX32	135 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	RPL8A	P17076	256 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	URA4	P20051	364 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	CKI1	P20485	582 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	CDC15	P27636	974 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	RPL8B	P29453	256 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	MCM10	P32354	571 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	VMA6	P32366	345 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	ISF1	P32488	338 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	SEA4	P38164	1038 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	VPS45	P38932	577 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	BUD16	P39988	312 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	MND2	P40577	368 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	EMP47	P43555	445 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	ILM1	P47155	203 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	UPF3	P48412	387 aa	Known RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	MRPS17	Q03246	237 aa	Predicted RBP	4.23	□□□□□ -1.73
YSH1	YLR277C	OMS1	Q06668	471 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	YCG1	Q06680	1035 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	RRT8	Q08219	342 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	TIP41	Q12199	356 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	ARP6	Q12509	438 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	ATG11	Q12527	1178 aa		4.23	□□□□□ -1.73
YSH1	YLR277C	ADE3	P07245	946 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	CBP6	P07253	162 aa	Predicted RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	BIK1	P11709	440 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	TAL1	P15019	335 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	AFT1	P22149	690 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	CRM1	P30822	1084 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	FUN30	P31380	1131 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	YBL010C	P32788	280 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	ORC2	P32833	620 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	GDH2	P33327	1092 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	PMT1	P33775	817 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	MYO3	P36006	1272 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	DHR2	P36009	735 aa	Predicted RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	GRS1	P38088	690 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	FTH1	P38310	465 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	RAD55	P38953	406 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	TAT2	P38967	592 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	FAR7	P43592	221 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
YSH1	YLR277C	DLD2	P46681	530 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	YJL049W	P47048	450 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	SQS1	P53866	767 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	DAK1	P54838	584 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	FCP1	Q03254	732 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	RSM24	Q03976	319 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms