RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W MAD3P47074 515 aa3.83□□□□□ -1.8
LCB5YLR260W SLD3P53135 668 aa3.83□□□□□ -1.8
LCB5YLR260W SEC5P89102 971 aa3.83□□□□□ -1.8
LCB5YLR260W EAR1Q03212 550 aa3.83□□□□□ -1.8
LCB5YLR260W YPL066WQ12194 479 aa3.83□□□□□ -1.8
LCB5YLR260W RKM4Q12504 494 aa3.83□□□□□ -1.8
LCB5YLR260W YMR084WA2P2R3 262 aa3.82□□□□□ -1.8
LCB5YLR260W MRP10O75012 95 aa3.82□□□□□ -1.8
LCB5YLR260W FUS1P11710 512 aa3.82□□□□□ -1.8
LCB5YLR260W POX1P13711 748 aa3.82□□□□□ -1.8
LCB5YLR260W MSD1P15179 658 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W PDX1P16451 410 aa3.82□□□□□ -1.8
LCB5YLR260W TKL1P23254 680 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W DOM34P33309 386 aa3.82□□□□□ -1.8
LCB5YLR260W RIB7P33312 244 aa3.82□□□□□ -1.8
LCB5YLR260W NIP100P33420 868 aa3.82□□□□□ -1.8
LCB5YLR260W PIN4P34217 668 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
LCB5YLR260W PIM1P36775 1133 aa3.82□□□□□ -1.8
LCB5YLR260W REG2P38232 338 aa3.82□□□□□ -1.8
LCB5YLR260W PCM1P38628 557 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W PEX28P38848 579 aa3.82□□□□□ -1.8
LCB5YLR260W RVS167P39743 482 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W KAP123P40069 1113 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W EMP65P40085 556 aa3.82□□□□□ -1.8
LCB5YLR260W RIC1P40395 1056 aa3.82□□□□□ -1.8
LCB5YLR260W DPH1P40487 425 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W RMD8P43620 662 aa3.82□□□□□ -1.8
LCB5YLR260W CIT3P43635 486 aa3.82□□□□□ -1.8
LCB5YLR260W KEL2P50090 882 aa3.82□□□□□ -1.8
LCB5YLR260W FMS1P50264 508 aa3.82□□□□□ -1.8
LCB5YLR260W YGL140CP53120 1219 aa3.82□□□□□ -1.8
LCB5YLR260W PIL1P53252 339 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W CNM67P53865 581 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W SIW14P53965 281 aa3.82□□□□□ -1.8
LCB5YLR260W YMR111CQ04461 462 aaPredicted RBP3.82□□□□□ -1.8
LCB5YLR260W PEX15Q08215 383 aa3.82□□□□□ -1.8
LCB5YLR260W NBA1Q08229 501 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W DSE3Q08729 430 aa3.82□□□□□ -1.8
LCB5YLR260W TRM11Q12463 433 aa3.82□□□□□ -1.8
LCB5YLR260W YDR524C-BQ3E6R4 66 aa3.82□□□□□ -1.8
LCB5YLR260W SEC23P15303 768 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W MSH1P25846 959 aa3.82□□□□□ -1.8
LCB5YLR260W DAL80P26343 269 aa3.82□□□□□ -1.8
LCB5YLR260W PEP3P27801 918 aa3.82□□□□□ -1.8
LCB5YLR260W CNS1P33313 385 aa3.82□□□□□ -1.8
LCB5YLR260W YKR018CP36114 725 aa3.82□□□□□ -1.8
LCB5YLR260W SHM2P37291 469 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W TOM71P38825 639 aaKnown RBP3.82□□□□□ -1.8
LCB5YLR260W AKR1P39010 764 aa3.82□□□□□ -1.8
LCB5YLR260W MEF2P39677 819 aa3.82□□□□□ -1.8
LCB5YLR260W IMA5P40884 581 aa3.82□□□□□ -1.8
LCB5YLR260W ALG2P43636 503 aa3.82□□□□□ -1.8
LCB5YLR260W SPO74P45819 413 aa3.82□□□□□ -1.8
LCB5YLR260W YGL176CP46945 554 aa3.82□□□□□ -1.8
LCB5YLR260W ASE1P50275 885 aa3.82□□□□□ -1.8
LCB5YLR260W YMR155WQ03795 547 aa3.82□□□□□ -1.8
LCB5YLR260W AVO1Q08236 1176 aa3.82□□□□□ -1.8
LCB5YLR260W HNM1P19807 563 aa3.81□□□□□ -1.8
LCB5YLR260W CAD1P24813 409 aaKnown RBP3.81□□□□□ -1.8
LCB5YLR260W MLS1P30952 554 aa3.81□□□□□ -1.8
LCB5YLR260W TFA2P36145 328 aa3.81□□□□□ -1.8
LCB5YLR260W ECM2P38241 364 aaKnown RBP3.81□□□□□ -1.8
LCB5YLR260W INP51P40559 946 aaKnown RBP3.81□□□□□ -1.8
LCB5YLR260W SHE10P53075 577 aa3.81□□□□□ -1.8
LCB5YLR260W AIM14P53109 570 aa3.81□□□□□ -1.8
LCB5YLR260W DAK1P54838 584 aaKnown RBP3.81□□□□□ -1.8
LCB5YLR260W ECM9Q02202 377 aa3.81□□□□□ -1.8
LCB5YLR260W SPP382Q06411 708 aaPredicted RBP3.81□□□□□ -1.8
LCB5YLR260W ARV1Q06541 321 aa3.81□□□□□ -1.8
LCB5YLR260W YDL073WQ07454 984 aa3.81□□□□□ -1.8
LCB5YLR260W WHI4Q07655 649 aaKnown RBP3.81□□□□□ -1.8
LCB5YLR260W ETT1Q08421 412 aaKnown RBP3.81□□□□□ -1.8
LCB5YLR260W YPR071WQ12346 211 aa3.81□□□□□ -1.8
LCB5YLR260W RIF1P29539 1916 aa3.81□□□□□ -1.8
LCB5YLR260W MAS2P11914 482 aa3.8□□□□□ -1.8
LCB5YLR260W PMS1P14242 873 aa3.8□□□□□ -1.8
LCB5YLR260W PET123P17558 318 aa3.8□□□□□ -1.8
LCB5YLR260W MCM4P30665 933 aaKnown RBP3.8□□□□□ -1.8
LCB5YLR260W SLC1P33333 303 aa3.8□□□□□ -1.8
LCB5YLR260W YKL107WP34251 309 aa3.8□□□□□ -1.8
LCB5YLR260W UBP11P36026 717 aa3.8□□□□□ -1.8
LCB5YLR260W PET10P36139 283 aa3.8□□□□□ -1.8
LCB5YLR260W FTH1P38310 465 aa3.8□□□□□ -1.8
LCB5YLR260W RIM11P38615 370 aa3.8□□□□□ -1.8
LCB5YLR260W AXL2P38928 823 aa3.8□□□□□ -1.8
LCB5YLR260W SMK1P41808 388 aa3.8□□□□□ -1.8
LCB5YLR260W SAD1P43589 448 aa3.8□□□□□ -1.8
LCB5YLR260W POL31P46957 487 aa3.8□□□□□ -1.8
LCB5YLR260W RPS7BP48164 190 aaKnown RBP3.8□□□□□ -1.8
LCB5YLR260W YGR153WP48238 217 aa3.8□□□□□ -1.8
LCB5YLR260W ZIP2P53061 704 aa3.8□□□□□ -1.8
LCB5YLR260W HST1P53685 503 aa3.8□□□□□ -1.8
LCB5YLR260W TEP1P53916 434 aa3.8□□□□□ -1.8
LCB5YLR260W SSL2Q00578 843 aa3.8□□□□□ -1.8
LCB5YLR260W ROD1Q02805 837 aa3.8□□□□□ -1.8
LCB5YLR260W YPL071CQ02864 156 aa3.8□□□□□ -1.8
LCB5YLR260W TIF35Q04067 274 aaKnown RBP3.8□□□□□ -1.8
LCB5YLR260W EST2Q06163 884 aa3.8□□□□□ -1.8
LCB5YLR260W SNF1P06782 633 aaKnown RBP3.8□□□□□ -1.8
LCB5YLR260W HSF1P10961 833 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms