RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C RIT1P23796 513 aa2.6□□□□□ -1.99
UBP11YKR098C MSS1P32559 526 aaPredicted RBP2.6□□□□□ -1.99
UBP11YKR098C SET3P36124 751 aa2.6□□□□□ -1.99
UBP11YKR098C BCD1P38772 366 aa2.6□□□□□ -1.99
UBP11YKR098C KAP123P40069 1113 aaKnown RBP2.6□□□□□ -1.99
UBP11YKR098C ELO3P40319 345 aa2.6□□□□□ -1.99
UBP11YKR098C PSF2P40359 213 aa2.6□□□□□ -1.99
UBP11YKR098C RFX1P48743 811 aa2.6□□□□□ -1.99
UBP11YKR098C UBC11P52492 156 aa2.6□□□□□ -1.99
UBP11YKR098C RRT6P53117 311 aaPredicted RBP2.6□□□□□ -1.99
UBP11YKR098C YMR018WQ04364 514 aa2.6□□□□□ -1.99
UBP11YKR098C ENT2Q05785 613 aa2.6□□□□□ -1.99
UBP11YKR098C ARR3Q06598 404 aa2.6□□□□□ -1.99
UBP11YKR098C TRM13Q12383 476 aa2.6□□□□□ -1.99
UBP11YKR098C MET3P08536 511 aa2.59□□□□□ -1.99
UBP11YKR098C PRP28P23394 588 aa2.59□□□□□ -1.99
UBP11YKR098C YCR015CP25616 317 aa2.59□□□□□ -1.99
UBP11YKR098C PRP45P28004 379 aaPredicted RBP2.59□□□□□ -1.99
UBP11YKR098C MVD1P32377 396 aaKnown RBP2.59□□□□□ -1.99
UBP11YKR098C SLC1P33333 303 aa2.59□□□□□ -1.99
UBP11YKR098C NPR3P38742 1146 aa2.59□□□□□ -1.99
UBP11YKR098C HRB1P38922 454 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
UBP11YKR098C NOC2P39744 710 aaKnown RBP2.59□□□□□ -1.99
UBP11YKR098C VFA1P40080 203 aa2.59□□□□□ -1.99
UBP11YKR098C CTF18P49956 741 aa2.59□□□□□ -1.99
UBP11YKR098C MNN10P50108 393 aaKnown RBP2.59□□□□□ -1.99
UBP11YKR098C IMA1P53051 589 aa2.59□□□□□ -1.99
UBP11YKR098C MCM6P53091 1017 aaKnown RBP2.59□□□□□ -1.99
UBP11YKR098C VID22Q05934 901 aa2.59□□□□□ -1.99
UBP11YKR098C ADY4Q05955 493 aa2.59□□□□□ -1.99
UBP11YKR098C CHS5Q12114 671 aaKnown RBP2.59□□□□□ -1.99
UBP11YKR098C GUK1P15454 187 aaKnown RBP2.59□□□□□ -2
UBP11YKR098C IMP2'P32351 346 aa2.59□□□□□ -2
UBP11YKR098C THI80P35202 319 aa2.59□□□□□ -2
UBP11YKR098C STB5P38699 743 aa2.59□□□□□ -2
UBP11YKR098C AXL2P38928 823 aa2.59□□□□□ -2
UBP11YKR098C PIG2P40187 538 aa2.59□□□□□ -2
UBP11YKR098C LRO1P40345 661 aa2.59□□□□□ -2
UBP11YKR098C TMA108P40462 946 aa2.59□□□□□ -2
UBP11YKR098C YJL163CP46996 555 aa2.59□□□□□ -2
UBP11YKR098C PAN2P53010 1115 aaPredicted RBP2.59□□□□□ -2
UBP11YKR098C PRP43P53131 767 aaKnown RBP2.59□□□□□ -2
UBP11YKR098C TRS31Q03337 283 aa2.59□□□□□ -2
UBP11YKR098C CSR1Q06705 408 aaKnown RBP2.59□□□□□ -2
UBP11YKR098C IRC13Q08630 104 aa2.59□□□□□ -2
UBP11YKR098C ICL2Q12031 575 aa2.59□□□□□ -2
UBP11YKR098C ZRT2Q12436 422 aa2.59□□□□□ -2
UBP11YKR098C YLR358CO13565 187 aa2.58□□□□□ -2
UBP11YKR098C LEU2P04173 364 aaPredicted RBP2.58□□□□□ -2
UBP11YKR098C PCK1P10963 549 aa2.58□□□□□ -2
UBP11YKR098C BIK1P11709 440 aa2.58□□□□□ -2
UBP11YKR098C BET2P20133 325 aa2.58□□□□□ -2
UBP11YKR098C VPS33P20795 691 aa2.58□□□□□ -2
UBP11YKR098C MAC1P35192 417 aa2.58□□□□□ -2
UBP11YKR098C YEL025CP39991 1188 aa2.58□□□□□ -2
UBP11YKR098C YER010CP40011 234 aa2.58□□□□□ -2
UBP11YKR098C TMN3P40071 706 aa2.58□□□□□ -2
UBP11YKR098C FAF1P40546 346 aaPredicted RBP2.58□□□□□ -2
UBP11YKR098C YGR054WP53235 642 aaKnown RBP2.58□□□□□ -2
UBP11YKR098C MDM1Q01846 1127 aa2.58□□□□□ -2
UBP11YKR098C ARA2Q04212 335 aa2.58□□□□□ -2
UBP11YKR098C AIM6Q07716 390 aa2.58□□□□□ -2
UBP11YKR098C RTP1Q12751 981 aa2.58□□□□□ -2
UBP11YKR098C YKL033W-AQ86ZR7 236 aa2.58□□□□□ -2
UBP11YKR098C PMA1P05030 918 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C SIR3P06701 978 aa2.57□□□□□ -2
UBP11YKR098C SEC12P11655 471 aa2.57□□□□□ -2
UBP11YKR098C RPS7AP26786 190 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C ARP2P32381 391 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C CBF2P32504 956 aa2.57□□□□□ -2
UBP11YKR098C MPE1P35728 441 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C PHO11P35842 467 aa2.57□□□□□ -2
UBP11YKR098C MUD2P36084 527 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C PHO12P38693 467 aa2.57□□□□□ -2
UBP11YKR098C REV7P38927 245 aa2.57□□□□□ -2
UBP11YKR098C YJL193WP39542 402 aa2.57□□□□□ -2
UBP11YKR098C KHA1P40309 873 aa2.57□□□□□ -2
UBP11YKR098C DPH1P40487 425 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C CAB2P40506 365 aa2.57□□□□□ -2
UBP11YKR098C BST1P43571 1029 aa2.57□□□□□ -2
UBP11YKR098C MPS3P47069 682 aa2.57□□□□□ -2
UBP11YKR098C FHN1P53279 174 aa2.57□□□□□ -2
UBP11YKR098C VPS64Q03944 604 aa2.57□□□□□ -2
UBP11YKR098C FRE5Q08908 694 aa2.57□□□□□ -2
UBP11YKR098C SAN1P22470 610 aa2.57□□□□□ -2
UBP11YKR098C RPT3P33298 428 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C MRPL36P36531 177 aa2.57□□□□□ -2
UBP11YKR098C FSH1P38777 243 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C UPF3P48412 387 aaKnown RBP2.57□□□□□ -2
UBP11YKR098C SAP4P53036 818 aa2.57□□□□□ -2
UBP11YKR098C COS12P53053 380 aa2.57□□□□□ -2
UBP11YKR098C ATG21Q02887 496 aa2.57□□□□□ -2
UBP11YKR098C IZH3Q07959 543 aa2.57□□□□□ -2
UBP11YKR098C MLH3Q12083 715 aa2.57□□□□□ -2
UBP11YKR098C MED1Q12321 566 aa2.57□□□□□ -2
UBP11YKR098C ERG4P25340 473 aa2.56□□□□□ -2
UBP11YKR098C RNQ1P25367 405 aa2.56□□□□□ -2
UBP11YKR098C PRE2P30656 287 aaKnown RBP2.56□□□□□ -2
UBP11YKR098C EFT1P32324 842 aaKnown RBP2.56□□□□□ -2
UBP11YKR098C NTH1P32356 751 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms