RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W BIK1P11709 440 aa4.84□□□□□ -1.64
ABF1YKL112W THR1P17423 357 aaKnown RBP4.84□□□□□ -1.64
ABF1YKL112W DBP3P20447 523 aaKnown RBP4.84□□□□□ -1.64
ABF1YKL112W SPB1P25582 841 aaPredicted RBP4.84□□□□□ -1.64
ABF1YKL112W RDS1P25611 832 aa4.84□□□□□ -1.64
ABF1YKL112W YME2P32843 850 aa4.84□□□□□ -1.64
ABF1YKL112W SEG2P34250 1132 aa4.84□□□□□ -1.64
ABF1YKL112W ARL1P38116 183 aaKnown RBP4.84□□□□□ -1.64
ABF1YKL112W YHL041WP38730 149 aa4.84□□□□□ -1.64
ABF1YKL112W UTP9P38882 575 aaKnown RBP4.84□□□□□ -1.64
ABF1YKL112W SAW1P39735 261 aa4.84□□□□□ -1.64
ABF1YKL112W AXL1P40851 1208 aa4.84□□□□□ -1.64
ABF1YKL112W GCN20P43535 752 aaKnown RBP4.84□□□□□ -1.64
ABF1YKL112W HSH155P49955 971 aaKnown RBP4.84□□□□□ -1.64
ABF1YKL112W IPI3P53877 555 aa4.84□□□□□ -1.64
ABF1YKL112W SIW14P53965 281 aa4.84□□□□□ -1.64
ABF1YKL112W TOF2Q02208 771 aa4.84□□□□□ -1.64
ABF1YKL112W ARA2Q04212 335 aa4.84□□□□□ -1.64
ABF1YKL112W SSL1Q04673 461 aaPredicted RBP4.84□□□□□ -1.64
ABF1YKL112W YOR296WQ08748 1289 aa4.84□□□□□ -1.64
ABF1YKL112W BUD7Q08754 746 aa4.84□□□□□ -1.64
ABF1YKL112W TRP3P00937 484 aa4.83□□□□□ -1.64
ABF1YKL112W HIS3P06633 220 aa4.83□□□□□ -1.64
ABF1YKL112W DBP2P24783 546 aaKnown RBP4.83□□□□□ -1.64
ABF1YKL112W SED4P25365 1065 aa4.83□□□□□ -1.64
ABF1YKL112W POT1P27796 417 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
ABF1YKL112W CDC12P32468 407 aaKnown RBP4.83□□□□□ -1.64
ABF1YKL112W PET309P32522 965 aaPredicted RBP4.83□□□□□ -1.64
ABF1YKL112W KTR2P33550 425 aa4.83□□□□□ -1.64
ABF1YKL112W VPS51P36116 164 aa4.83□□□□□ -1.64
ABF1YKL112W POA1P38218 177 aa4.83□□□□□ -1.64
ABF1YKL112W GPP2P40106 250 aaKnown RBP4.83□□□□□ -1.64
ABF1YKL112W YIL077CP40508 320 aa4.83□□□□□ -1.64
ABF1YKL112W OYE3P41816 400 aaPredicted RBP4.83□□□□□ -1.64
ABF1YKL112W PTK2P47116 818 aaKnown RBP4.83□□□□□ -1.64
ABF1YKL112W RBG2P53295 368 aaKnown RBP4.83□□□□□ -1.64
ABF1YKL112W TOF1P53840 1238 aa4.83□□□□□ -1.64
ABF1YKL112W MRPL19P53875 158 aa4.83□□□□□ -1.64
ABF1YKL112W YML108WQ03759 105 aa4.83□□□□□ -1.64
ABF1YKL112W EIS1Q05050 843 aaKnown RBP4.83□□□□□ -1.64
ABF1YKL112W FMP40Q08968 688 aaPredicted RBP4.83□□□□□ -1.64
ABF1YKL112W PRB1P09232 635 aa4.82□□□□□ -1.64
ABF1YKL112W NCP1P16603 691 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W MNE1P24720 663 aa4.82□□□□□ -1.64
ABF1YKL112W PRD1P25375 712 aa4.82□□□□□ -1.64
ABF1YKL112W YJU2P28320 278 aaPredicted RBP4.82□□□□□ -1.64
ABF1YKL112W RPL8BP29453 256 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W RPT1P33299 467 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W NUP133P36161 1157 aa4.82□□□□□ -1.64
ABF1YKL112W MMS4P38257 691 aa4.82□□□□□ -1.64
ABF1YKL112W YBR138CP38277 524 aa4.82□□□□□ -1.64
ABF1YKL112W POP7P38291 140 aa4.82□□□□□ -1.64
ABF1YKL112W PRM9P39551 298 aa4.82□□□□□ -1.64
ABF1YKL112W RSP5P39940 809 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W OSW5P40219 148 aa4.82□□□□□ -1.64
ABF1YKL112W QDR1P40475 563 aa4.82□□□□□ -1.64
ABF1YKL112W SPO22P40511 975 aa4.82□□□□□ -1.64
ABF1YKL112W DUG1P43616 481 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W VPS53P47061 822 aa4.82□□□□□ -1.64
ABF1YKL112W UPF3P48412 387 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W ZIP2P53061 704 aa4.82□□□□□ -1.64
ABF1YKL112W PIB2P53191 635 aa4.82□□□□□ -1.64
ABF1YKL112W ORM1P53224 222 aa4.82□□□□□ -1.64
ABF1YKL112W YNR068CP53754 272 aa4.82□□□□□ -1.64
ABF1YKL112W PNP1Q05788 311 aa4.82□□□□□ -1.64
ABF1YKL112W KAP95Q06142 861 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W DCS1Q06151 350 aa4.82□□□□□ -1.64
ABF1YKL112W SEC10Q06245 871 aa4.82□□□□□ -1.64
ABF1YKL112W ATG17Q06410 417 aa4.82□□□□□ -1.64
ABF1YKL112W YOL036WQ08206 761 aa4.82□□□□□ -1.64
ABF1YKL112W FLC1Q08967 793 aa4.82□□□□□ -1.64
ABF1YKL112W YOR289WQ12012 251 aaPredicted RBP4.82□□□□□ -1.64
ABF1YKL112W FMP27Q06179 2628 aa4.82□□□□□ -1.64
ABF1YKL112W LAM4P38800 1345 aa4.82□□□□□ -1.64
ABF1YKL112W HXK1P04806 485 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W ARG80P07249 177 aa4.82□□□□□ -1.64
ABF1YKL112W YPK2P18961 677 aa4.82□□□□□ -1.64
ABF1YKL112W ROX1P25042 368 aa4.82□□□□□ -1.64
ABF1YKL112W SSO1P32867 290 aa4.82□□□□□ -1.64
ABF1YKL112W BEM3P32873 1128 aa4.82□□□□□ -1.64
ABF1YKL112W MSN4P33749 630 aa4.82□□□□□ -1.64
ABF1YKL112W YKL069WP36088 180 aa4.82□□□□□ -1.64
ABF1YKL112W CBR1P38626 284 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W APM2P38700 605 aa4.82□□□□□ -1.64
ABF1YKL112W GND1P38720 489 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W MNL1P38888 796 aa4.82□□□□□ -1.64
ABF1YKL112W SAK1P38990 1142 aa4.82□□□□□ -1.64
ABF1YKL112W SLN1P39928 1220 aaPredicted RBP4.82□□□□□ -1.64
ABF1YKL112W NAS2P40555 220 aa4.82□□□□□ -1.64
ABF1YKL112W DLD2P46681 530 aaKnown RBP4.82□□□□□ -1.64
ABF1YKL112W ALB1P47019 175 aaPredicted RBP4.82□□□□□ -1.64
ABF1YKL112W MDV1P47025 714 aa4.82□□□□□ -1.64
ABF1YKL112W SAM37P50110 327 aa4.82□□□□□ -1.64
ABF1YKL112W MNT2P53059 558 aa4.82□□□□□ -1.64
ABF1YKL112W YGL242CP53066 181 aa4.82□□□□□ -1.64
ABF1YKL112W NPY1P53164 384 aa4.82□□□□□ -1.64
ABF1YKL112W CGR1P53188 120 aa4.82□□□□□ -1.64
ABF1YKL112W COG2P53271 262 aa4.82□□□□□ -1.64
ABF1YKL112W DSE4P53753 1117 aa4.82□□□□□ -1.64
ABF1YKL112W RTT103Q05543 409 aa4.82□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms