RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR043C	YIR043C	ADE3	P07245	946 aa	Known RBP	6.14	□□□□□ -1.43
YIR043C	YIR043C	MTF2	P10849	440 aa		6.14	□□□□□ -1.43
YIR043C	YIR043C	RIT1	P23796	513 aa		6.14	□□□□□ -1.43
YIR043C	YIR043C	CHS3	P29465	1165 aa		6.14	□□□□□ -1.43
YIR043C	YIR043C	YBR138C	P38277	524 aa		6.14	□□□□□ -1.43
YIR043C	YIR043C	BCD1	P38772	366 aa		6.14	□□□□□ -1.43
YIR043C	YIR043C	UBC11	P52492	156 aa		6.14	□□□□□ -1.43
YIR043C	YIR043C	ARA2	Q04212	335 aa		6.14	□□□□□ -1.43
YIR043C	YIR043C	CHS5	Q12114	671 aa	Known RBP	6.14	□□□□□ -1.43
YIR043C	YIR043C	TRM13	Q12383	476 aa		6.14	□□□□□ -1.43
YIR043C	YIR043C	PRP28	P23394	588 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	YCR015C	P25616	317 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	DCG1	P32460	244 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	STB5	P38699	743 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	REV7	P38927	245 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	KAP123	P40069	1113 aa	Known RBP	6.13	□□□□□ -1.43
YIR043C	YIR043C	VFA1	P40080	203 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	PAN2	P53010	1115 aa	Predicted RBP	6.13	□□□□□ -1.43
YIR043C	YIR043C	MEP3	P53390	489 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	ENT2	Q05785	613 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	YDR056C	Q12025	205 aa		6.13	□□□□□ -1.43
YIR043C	YIR043C	UBC1	P21734	215 aa	Known RBP	6.12	□□□□□ -1.43
YIR043C	YIR043C	FRD1	P32614	470 aa	Known RBP	6.12	□□□□□ -1.43
YIR043C	YIR043C	MRPL36	P36531	177 aa		6.12	□□□□□ -1.43
YIR043C	YIR043C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	6.12	□□□□□ -1.43	not detected
YIR043C	YIR043C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	6.12	□□□□□ -1.43	not detected
YIR043C	YIR043C	CAB2	P40506	365 aa		6.12	□□□□□ -1.43
YIR043C	YIR043C	BUL1	P48524	976 aa		6.12	□□□□□ -1.43
YIR043C	YIR043C	FRE5	Q08908	694 aa		6.12	□□□□□ -1.43
YIR043C	YIR043C	CTT1	P06115	562 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	SNF1	P06782	633 aa	Known RBP	6.11	□□□□□ -1.43
YIR043C	YIR043C	ERG4	P25340	473 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	RNQ1	P25367	405 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	RPS7A	P26786	190 aa	Known RBP	6.11	□□□□□ -1.43
YIR043C	YIR043C	EFT1	P32324	842 aa	Known RBP	6.11	□□□□□ -1.43
YIR043C	YIR043C	RPT3	P33298	428 aa	Known RBP	6.11	□□□□□ -1.43
YIR043C	YIR043C	IFA38	P38286	347 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	UME6	P39001	836 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	YEL025C	P39991	1188 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	POL31	P46957	487 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	YJL163C	P46996	555 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	MPS3	P47069	682 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	BNA1	P47096	177 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	YGR054W	P53235	642 aa	Known RBP	6.11	□□□□□ -1.43
YIR043C	YIR043C	TRS31	Q03337	283 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	VPS64	Q03944	604 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	RRI2	Q12348	645 aa		6.11	□□□□□ -1.43
YIR043C	YIR043C	VPS33	P20795	691 aa		6.1	□□□□□ -1.43
YIR043C	YIR043C	NTH1	P32356	751 aa		6.1	□□□□□ -1.43
YIR043C	YIR043C	ARP2	P32381	391 aa	Known RBP	6.1	□□□□□ -1.43
YIR043C	YIR043C	YJL193W	P39542	402 aa		6.1	□□□□□ -1.43
YIR043C	YIR043C	TMA108	P40462	946 aa		6.1	□□□□□ -1.43
YIR043C	YIR043C	SAP4	P53036	818 aa		6.1	□□□□□ -1.43
YIR043C	YIR043C	CLF1	Q12309	687 aa	Predicted RBP	6.1	□□□□□ -1.43
YIR043C	YIR043C	YKL033W-A	Q86ZR7	236 aa		6.1	□□□□□ -1.43
YIR043C	YIR043C	PMA1	P05030	918 aa	Known RBP	6.09	□□□□□ -1.43
YIR043C	YIR043C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
YIR043C	YIR043C	RAD16	P31244	790 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	PHO11	P35842	467 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	SET3	P36124	751 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	PHO12	P38693	467 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	AXL2	P38928	823 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	NOC2	P39744	710 aa	Known RBP	6.09	□□□□□ -1.43
YIR043C	YIR043C	LRO1	P40345	661 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	PHO23	P50947	330 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	ATG21	Q02887	496 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	VID22	Q05934	901 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	ADY4	Q05955	493 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	CSR1	Q06705	408 aa	Known RBP	6.09	□□□□□ -1.43
YIR043C	YIR043C	AIM39	Q08223	395 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	ICL2	Q12031	575 aa		6.09	□□□□□ -1.43
YIR043C	YIR043C	LEU2	P04173	364 aa	Predicted RBP	6.08	□□□□□ -1.44
YIR043C	YIR043C	GUK1	P15454	187 aa	Known RBP	6.08	□□□□□ -1.44
YIR043C	YIR043C	BET2	P20133	325 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	HRR25	P29295	494 aa	Known RBP	6.08	□□□□□ -1.44
YIR043C	YIR043C	MSS1	P32559	526 aa	Predicted RBP	6.08	□□□□□ -1.44
YIR043C	YIR043C	THI80	P35202	319 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	NPR3	P38742	1146 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	FSH1	P38777	243 aa	Known RBP	6.08	□□□□□ -1.44
YIR043C	YIR043C	FMP52	P40008	231 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	CTF18	P49956	741 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	IMA1	P53051	589 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	RRT6	P53117	311 aa	Predicted RBP	6.08	□□□□□ -1.44
YIR043C	YIR043C	CLU1	Q03690	1277 aa	Known RBP	6.08	□□□□□ -1.44
YIR043C	YIR043C	HOF1	Q05080	669 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	ARR3	Q06598	404 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	TRM8	Q12009	286 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	MLH3	Q12083	715 aa		6.08	□□□□□ -1.44
YIR043C	YIR043C	ALG7	P07286	448 aa		6.07	□□□□□ -1.44
YIR043C	YIR043C	DSS4	P32601	143 aa		6.07	□□□□□ -1.44
YIR043C	YIR043C	KHA1	P40309	873 aa		6.07	□□□□□ -1.44
YIR043C	YIR043C	RNT1	Q02555	471 aa		6.07	□□□□□ -1.44
YIR043C	YIR043C	IZH3	Q07959	543 aa		6.07	□□□□□ -1.44
YIR043C	YIR043C	SIR3	P06701	978 aa		6.06	□□□□□ -1.44
YIR043C	YIR043C	FUB1	P25659	250 aa		6.06	□□□□□ -1.44
YIR043C	YIR043C	PRE2	P30656	287 aa	Known RBP	6.06	□□□□□ -1.44
YIR043C	YIR043C	TEF4	P36008	412 aa	Known RBP	6.06	□□□□□ -1.44
YIR043C	YIR043C	CTP1	P38152	299 aa		6.06	□□□□□ -1.44
YIR043C	YIR043C	IDS2	P46958	469 aa		6.06	□□□□□ -1.44
YIR043C	YIR043C	AVT1	P47082	602 aa		6.06	□□□□□ -1.44

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