RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C APA1P16550 321 aaKnown RBP3.77□□□□□ -1.81
CDC40YDR364C KIN3P22209 435 aa3.77□□□□□ -1.81
CDC40YDR364C AFR1P33304 620 aa3.77□□□□□ -1.81
CDC40YDR364C APL2P36000 726 aaPredicted RBP3.77□□□□□ -1.81
CDC40YDR364C EMC3P36039 253 aa3.77□□□□□ -1.81
CDC40YDR364C YBR053CP38235 358 aa3.77□□□□□ -1.81
CDC40YDR364C YHL041WP38730 149 aa3.77□□□□□ -1.81
CDC40YDR364C RPP1P38786 293 aa3.77□□□□□ -1.81
CDC40YDR364C NPR2P39923 615 aa3.77□□□□□ -1.81
CDC40YDR364C SAP185P40856 1058 aa3.77□□□□□ -1.81
CDC40YDR364C FKH2P41813 862 aa3.77□□□□□ -1.81
CDC40YDR364C ALY2P47029 1046 aa3.77□□□□□ -1.81
CDC40YDR364C GLO1P50107 326 aa3.77□□□□□ -1.81
CDC40YDR364C SLD3P53135 668 aa3.77□□□□□ -1.81
CDC40YDR364C SEC5P89102 971 aa3.77□□□□□ -1.81
CDC40YDR364C MDM1Q01846 1127 aa3.77□□□□□ -1.81
CDC40YDR364C NHX1Q04121 633 aa3.77□□□□□ -1.81
CDC40YDR364C PSR2Q07949 397 aa3.77□□□□□ -1.81
CDC40YDR364C ENV7Q12003 364 aa3.77□□□□□ -1.81
CDC40YDR364C YPR027CQ12079 277 aa3.77□□□□□ -1.81
CDC40YDR364C BUG1Q12191 341 aa3.77□□□□□ -1.81
CDC40YDR364C PHO81P17442 1178 aa3.76□□□□□ -1.81
CDC40YDR364C COX11P19516 300 aaKnown RBP3.76□□□□□ -1.81
CDC40YDR364C ADY2P25613 283 aa3.76□□□□□ -1.81
CDC40YDR364C GCD7P32502 381 aaPredicted RBP3.76□□□□□ -1.81
CDC40YDR364C RPD3P32561 433 aa3.76□□□□□ -1.81
CDC40YDR364C SER1P33330 395 aaKnown RBP3.76□□□□□ -1.81
CDC40YDR364C DID4P36108 232 aa3.76□□□□□ -1.81
CDC40YDR364C EMP65P40085 556 aa3.76□□□□□ -1.81
CDC40YDR364C YIL108WP40483 696 aaKnown RBP3.76□□□□□ -1.81
CDC40YDR364C YJL163CP46996 555 aa3.76□□□□□ -1.81
CDC40YDR364C YGL082WP53155 381 aa3.76□□□□□ -1.81
CDC40YDR364C MRPS35P53292 345 aa3.76□□□□□ -1.81
CDC40YDR364C YML131WQ03102 365 aa3.76□□□□□ -1.81
CDC40YDR364C ATP25Q03153 612 aa3.76□□□□□ -1.81
CDC40YDR364C REH1Q06709 432 aa3.76□□□□□ -1.81
CDC40YDR364C LPD1P09624 499 aaKnown RBP3.76□□□□□ -1.81
CDC40YDR364C YKU70P32807 602 aa3.76□□□□□ -1.81
CDC40YDR364C JNM1P36224 373 aa3.76□□□□□ -1.81
CDC40YDR364C RPT2P40327 437 aaKnown RBP3.76□□□□□ -1.81
CDC40YDR364C RET2P43621 546 aa3.76□□□□□ -1.81
CDC40YDR364C IML2P47031 731 aa3.76□□□□□ -1.81
CDC40YDR364C AMA1P50082 593 aa3.76□□□□□ -1.81
CDC40YDR364C UBC9P50623 157 aaPredicted RBP3.76□□□□□ -1.81
CDC40YDR364C PTA1Q01329 785 aaPredicted RBP3.76□□□□□ -1.81
CDC40YDR364C YHM2Q04013 314 aa3.76□□□□□ -1.81
CDC40YDR364C YDR338CQ05497 695 aa3.76□□□□□ -1.81
CDC40YDR364C RAD50P12753 1312 aa3.75□□□□□ -1.81
CDC40YDR364C PRP4P20053 465 aaKnown RBP3.75□□□□□ -1.81
CDC40YDR364C DAL7P21826 554 aa3.75□□□□□ -1.81
CDC40YDR364C RFA1P22336 621 aaKnown RBP3.75□□□□□ -1.81
CDC40YDR364C HEM12P32347 362 aaPredicted RBP3.75□□□□□ -1.81
CDC40YDR364C SAP190P36123 1033 aa3.75□□□□□ -1.81
CDC40YDR364C HSL7P38274 827 aa3.75□□□□□ -1.81
CDC40YDR364C SHR5P41912 237 aa3.75□□□□□ -1.81
CDC40YDR364C BFA1P47113 574 aa3.75□□□□□ -1.81
CDC40YDR364C LYS4P49367 693 aaPredicted RBP3.75□□□□□ -1.81
CDC40YDR364C ECM9Q02202 377 aa3.75□□□□□ -1.81
CDC40YDR364C FCP1Q03254 732 aa3.75□□□□□ -1.81
CDC40YDR364C SKY1Q03656 742 aa3.75□□□□□ -1.81
CDC40YDR364C YMR018WQ04364 514 aa3.75□□□□□ -1.81
CDC40YDR364C CRR1Q05790 422 aa3.75□□□□□ -1.81
CDC40YDR364C ECM38Q05902 660 aaPredicted RBP3.75□□□□□ -1.81
CDC40YDR364C NKP2Q06162 153 aa3.75□□□□□ -1.81
CDC40YDR364C NCB2Q92317 146 aa3.75□□□□□ -1.81
CDC40YDR364C RFC1P38630 861 aaKnown RBP3.74□□□□□ -1.81
CDC40YDR364C RRP8P38961 392 aaKnown RBP3.74□□□□□ -1.81
CDC40YDR364C ACA1P39970 489 aa3.74□□□□□ -1.81
CDC40YDR364C CCT5P40413 562 aaKnown RBP3.74□□□□□ -1.81
CDC40YDR364C TAD1P53065 400 aa3.74□□□□□ -1.81
CDC40YDR364C NPY1P53164 384 aa3.74□□□□□ -1.81
CDC40YDR364C YKR011CQ02209 353 aa3.74□□□□□ -1.81
CDC40YDR364C PEX15Q08215 383 aa3.74□□□□□ -1.81
CDC40YDR364C ERP4Q12450 207 aa3.74□□□□□ -1.81
CDC40YDR364C SSK22P25390 1331 aaPredicted RBP3.73□□□□□ -1.81
CDC40YDR364C SAC3P46674 1301 aa3.73□□□□□ -1.81
CDC40YDR364C PDR18P53756 1333 aa3.73□□□□□ -1.81
CDC40YDR364C DIF1O13577 133 aa3.73□□□□□ -1.81
CDC40YDR364C SUP35P05453 685 aaKnown RBP3.73□□□□□ -1.81
CDC40YDR364C SEC18P18759 758 aaKnown RBP3.73□□□□□ -1.81
CDC40YDR364C CHS3P29465 1165 aa3.73□□□□□ -1.81
CDC40YDR364C CCR4P31384 837 aaKnown RBP3.73□□□□□ -1.81
CDC40YDR364C TYE7P33122 291 aaPredicted RBP3.73□□□□□ -1.81
CDC40YDR364C MNT3P40549 630 aa3.73□□□□□ -1.81
CDC40YDR364C YFL052WP43551 465 aa3.73□□□□□ -1.81
CDC40YDR364C BNA2P47125 453 aa3.73□□□□□ -1.81
CDC40YDR364C RNR4P49723 345 aaKnown RBP3.73□□□□□ -1.81
CDC40YDR364C HDA1P53973 706 aa3.73□□□□□ -1.81
CDC40YDR364C RRI2Q12348 645 aa3.73□□□□□ -1.81
CDC40YDR364C RPS9AO13516 197 aaKnown RBP3.72□□□□□ -1.81
CDC40YDR364C CDC16P09798 840 aa3.72□□□□□ -1.81
CDC40YDR364C RPS21AP0C0V8 87 aaKnown RBP3.72□□□□□ -1.81
CDC40YDR364C DMC1P25453 334 aa3.72□□□□□ -1.81
CDC40YDR364C YCL002CP25565 263 aa3.72□□□□□ -1.81
CDC40YDR364C MCM10P32354 571 aa3.72□□□□□ -1.81
CDC40YDR364C YHR078WP38799 552 aa3.72□□□□□ -1.81
CDC40YDR364C NDE1P40215 560 aa3.72□□□□□ -1.81
CDC40YDR364C TMA108P40462 946 aa3.72□□□□□ -1.81
CDC40YDR364C RLP7P40693 322 aaKnown RBP3.72□□□□□ -1.81
CDC40YDR364C CEP3P40969 608 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms