RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C REX3Q12090 404 aa1.55□□□□□ -2.16
MSH3YCR092C CDC36P06100 191 aaPredicted RBP1.55□□□□□ -2.16
MSH3YCR092C MTF2P10849 440 aa1.55□□□□□ -2.16
MSH3YCR092C VPS3P23643 1011 aa1.55□□□□□ -2.16
MSH3YCR092C LDB16P25587 256 aa1.55□□□□□ -2.16
MSH3YCR092C PRS1P32895 427 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C SGE1P33335 543 aa1.55□□□□□ -2.16
MSH3YCR092C PTI1P39927 425 aaPredicted RBP1.55□□□□□ -2.16
MSH3YCR092C EAF5P39995 279 aa1.55□□□□□ -2.16
MSH3YCR092C YTA12P40341 825 aa1.55□□□□□ -2.16
MSH3YCR092C SCD6P45978 349 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
MSH3YCR092C PET130P47065 347 aa1.55□□□□□ -2.16
MSH3YCR092C YJR054WP47114 497 aa1.55□□□□□ -2.16
MSH3YCR092C CDC55Q00362 526 aa1.55□□□□□ -2.16
MSH3YCR092C VTC3Q02725 835 aa1.55□□□□□ -2.16
MSH3YCR092C VPS72Q03388 795 aa1.55□□□□□ -2.16
MSH3YCR092C ECM22Q05958 814 aaPredicted RBP1.55□□□□□ -2.16
MSH3YCR092C LEU9Q12166 604 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C SLP1Q12232 587 aa1.55□□□□□ -2.16
MSH3YCR092C COX3P00420 269 aa1.55□□□□□ -2.16
MSH3YCR092C RNR2P09938 399 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C PUT4P15380 627 aa1.55□□□□□ -2.16
MSH3YCR092C OM45P16547 393 aa1.55□□□□□ -2.16
MSH3YCR092C PRO3P32263 286 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C GND1P38720 489 aaKnown RBP1.55□□□□□ -2.16
MSH3YCR092C PCI8P40512 444 aa1.55□□□□□ -2.16
MSH3YCR092C SMC3P47037 1230 aa1.55□□□□□ -2.16
MSH3YCR092C BIR1P47134 954 aa1.55□□□□□ -2.16
MSH3YCR092C ROM1P53046 1155 aa1.55□□□□□ -2.16
MSH3YCR092C NUT2Q06213 157 aa1.55□□□□□ -2.16
MSH3YCR092C ADY3Q07732 790 aa1.55□□□□□ -2.16
MSH3YCR092C RTT10Q08924 1013 aa1.55□□□□□ -2.16
MSH3YCR092C GPM2Q12008 311 aa1.55□□□□□ -2.16
MSH3YCR092C CTF3Q12748 733 aa1.55□□□□□ -2.16
MSH3YCR092C SMC6Q12749 1114 aa1.55□□□□□ -2.16
MSH3YCR092C MRP10O75012 95 aa1.54□□□□□ -2.16
MSH3YCR092C TOM70P07213 617 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C PEP5P12868 1029 aa1.54□□□□□ -2.16
MSH3YCR092C KRS1P15180 591 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C PET112P33893 541 aa1.54□□□□□ -2.16
MSH3YCR092C SEG2P34250 1132 aa1.54□□□□□ -2.16
MSH3YCR092C RPN10P38886 268 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C DUN1P39009 513 aa1.54□□□□□ -2.16
MSH3YCR092C KHA1P40309 873 aa1.54□□□□□ -2.16
MSH3YCR092C MND2P40577 368 aa1.54□□□□□ -2.16
MSH3YCR092C CHS6P40955 746 aa1.54□□□□□ -2.16
MSH3YCR092C LEM3P42838 414 aa1.54□□□□□ -2.16
MSH3YCR092C ASK10P48361 1146 aa1.54□□□□□ -2.16
MSH3YCR092C SCS3P53012 380 aa1.54□□□□□ -2.16
MSH3YCR092C VAC7P53950 1165 aa1.54□□□□□ -2.16
MSH3YCR092C BLS1Q06071 122 aa1.54□□□□□ -2.16
MSH3YCR092C CRD1Q07560 283 aa1.54□□□□□ -2.16
MSH3YCR092C SLK19Q08581 821 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C OXR1Q08952 273 aa1.54□□□□□ -2.16
MSH3YCR092C PIN2Q12057 282 aa1.54□□□□□ -2.16
MSH3YCR092C TY4B-PA0A0B7P3V8 1104 aa1.54□□□□□ -2.16
MSH3YCR092C ASP3-2P0CX77 362 aa1.54□□□□□ -2.16
MSH3YCR092C ASP3-3P0CX78 362 aa1.54□□□□□ -2.16
MSH3YCR092C ASP3-4P0CX79 362 aa1.54□□□□□ -2.16
MSH3YCR092C ASP3-1P0CZ17 362 aa1.54□□□□□ -2.16
MSH3YCR092C TAF13P11747 167 aa1.54□□□□□ -2.16
MSH3YCR092C DBP5P20449 482 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C AAT2P23542 418 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C PPH22P23595 377 aa1.54□□□□□ -2.16
MSH3YCR092C GDA1P32621 518 aa1.54□□□□□ -2.16
MSH3YCR092C MRP4P32902 394 aa1.54□□□□□ -2.16
MSH3YCR092C ERP2P39704 215 aa1.54□□□□□ -2.16
MSH3YCR092C PSA1P41940 361 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C UBX6P47049 396 aa1.54□□□□□ -2.16
MSH3YCR092C RPS7BP48164 190 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C ASN1P49089 572 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C ASE1P50275 885 aa1.54□□□□□ -2.16
MSH3YCR092C PYK2P52489 506 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C PCL10P53124 433 aa1.54□□□□□ -2.16
MSH3YCR092C YGL036WP53185 909 aaPredicted RBP1.54□□□□□ -2.16
MSH3YCR092C YNR063WP53749 607 aa1.54□□□□□ -2.16
MSH3YCR092C HDA1P53973 706 aa1.54□□□□□ -2.16
MSH3YCR092C TRS130Q03660 1102 aa1.54□□□□□ -2.16
MSH3YCR092C YLR030WQ07967 263 aa1.54□□□□□ -2.16
MSH3YCR092C ELG1Q12050 791 aa1.54□□□□□ -2.16
MSH3YCR092C GET3Q12154 354 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C PKH2Q12236 1081 aaKnown RBP1.54□□□□□ -2.16
MSH3YCR092C TY4A-HQ6Q5P6 413 aa1.54□□□□□ -2.16
MSH3YCR092C SPE1P08432 466 aa1.53□□□□□ -2.16
MSH3YCR092C ISY1P21374 235 aaPredicted RBP1.53□□□□□ -2.16
MSH3YCR092C NFS1P25374 497 aa1.53□□□□□ -2.16
MSH3YCR092C EMC1P25574 760 aa1.53□□□□□ -2.16
MSH3YCR092C NAM7P30771 971 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C MKK2P32491 506 aa1.53□□□□□ -2.16
MSH3YCR092C RML2P32611 393 aa1.53□□□□□ -2.16
MSH3YCR092C RPT3P33298 428 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C UTH1P36135 365 aa1.53□□□□□ -2.16
MSH3YCR092C FTH1P38310 465 aa1.53□□□□□ -2.16
MSH3YCR092C MMS21P38632 267 aa1.53□□□□□ -2.16
MSH3YCR092C MTG2P38860 518 aa1.53□□□□□ -2.16
MSH3YCR092C YAL037WP39728 267 aa1.53□□□□□ -2.16
MSH3YCR092C YIL161WP40449 235 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C HXT8P40886 569 aa1.53□□□□□ -2.16
MSH3YCR092C ALR2P43553 858 aa1.53□□□□□ -2.16
MSH3YCR092C YGL039WP53183 348 aaKnown RBP1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms