RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	RPL7B	Q12213	244 aa	Known RBP	4.66	□□□□□ -1.66
APM3	YBR288C	GAT1	P43574	510 aa		4.65	□□□□□ -1.66
APM3	YBR288C	ARR3	Q06598	404 aa		4.65	□□□□□ -1.66
APM3	YBR288C	HMG2	P12684	1045 aa		4.64	□□□□□ -1.67
APM3	YBR288C	HOP1	P20050	605 aa		4.64	□□□□□ -1.67
APM3	YBR288C	LRO1	P40345	661 aa		4.64	□□□□□ -1.67
APM3	YBR288C	ATG36	P46983	293 aa		4.64	□□□□□ -1.67
APM3	YBR288C	ENP2	P48234	707 aa	Known RBP	4.64	□□□□□ -1.67
APM3	YBR288C	RPS15	Q01855	142 aa	Known RBP	4.64	□□□□□ -1.67
APM3	YBR288C	HEM1	P09950	548 aa	Predicted RBP	4.63	□□□□□ -1.67
APM3	YBR288C	AQY1	P0CD91	305 aa		4.63	□□□□□ -1.67
APM3	YBR288C	WHI2	P12611	486 aa		4.63	□□□□□ -1.67
APM3	YBR288C	CAP1	P28495	268 aa	Known RBP	4.63	□□□□□ -1.67
APM3	YBR288C	DAL3	P32459	195 aa		4.63	□□□□□ -1.67
APM3	YBR288C	HXT4	P32467	576 aa		4.63	□□□□□ -1.67
APM3	YBR288C	FPR3	P38911	411 aa	Known RBP	4.63	□□□□□ -1.67
APM3	YBR288C	ATP12	P22135	325 aa		4.62	□□□□□ -1.67
APM3	YBR288C	SER1	P33330	395 aa	Known RBP	4.62	□□□□□ -1.67
APM3	YBR288C	RMA1	P36001	430 aa	Known RBP	4.62	□□□□□ -1.67
APM3	YBR288C	ORM2	Q06144	216 aa		4.62	□□□□□ -1.67
APM3	YBR288C	NGL1	Q08213	363 aa	Known RBP	4.62	□□□□□ -1.67
APM3	YBR288C	TGS1	Q12052	315 aa		4.62	□□□□□ -1.67
APM3	YBR288C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
APM3	YBR288C	SEC3	P33332	1336 aa	Known RBP	4.62	□□□□□ -1.67
APM3	YBR288C	LOT5	P34234	306 aa		4.62	□□□□□ -1.67
APM3	YBR288C	ULP2	P40537	1034 aa	Predicted RBP	4.62	□□□□□ -1.67
APM3	YBR288C	YJL043W	P47053	257 aa		4.62	□□□□□ -1.67
APM3	YBR288C	RNR4	P49723	345 aa	Known RBP	4.62	□□□□□ -1.67
APM3	YBR288C	SAP4	P53036	818 aa		4.62	□□□□□ -1.67
APM3	YBR288C	ATP23	P53722	227 aa		4.62	□□□□□ -1.67
APM3	YBR288C	FRE7	Q12333	620 aa		4.62	□□□□□ -1.67
APM3	YBR288C	RNR3	P21672	869 aa	Known RBP	4.61	□□□□□ -1.67
APM3	YBR288C	MRPL9	P31334	269 aa		4.61	□□□□□ -1.67
APM3	YBR288C	RPC34	P32910	317 aa		4.61	□□□□□ -1.67
APM3	YBR288C	YJL193W	P39542	402 aa		4.61	□□□□□ -1.67
APM3	YBR288C	SQS1	P53866	767 aa	Known RBP	4.61	□□□□□ -1.67
APM3	YBR288C	RGT2	Q12300	763 aa		4.61	□□□□□ -1.67
APM3	YBR288C	CCL1	P37366	393 aa		4.6	□□□□□ -1.67
APM3	YBR288C	YPT10	P38146	199 aa		4.6	□□□□□ -1.67
APM3	YBR288C	EXO1	P39875	702 aa		4.6	□□□□□ -1.67
APM3	YBR288C	YFL015C	P43578	164 aa		4.6	□□□□□ -1.67
APM3	YBR288C	USA1	Q03714	838 aa		4.6	□□□□□ -1.67
APM3	YBR288C	GFD1	Q04839	188 aa	Known RBP	4.6	□□□□□ -1.67
APM3	YBR288C	TUF1	P02992	437 aa	Known RBP	4.59	□□□□□ -1.67
APM3	YBR288C	VPS33	P20795	691 aa		4.59	□□□□□ -1.67
APM3	YBR288C	BRN1	P38170	754 aa		4.59	□□□□□ -1.67
APM3	YBR288C	STP1	Q00947	519 aa		4.59	□□□□□ -1.67
APM3	YBR288C	IRC3	Q06683	689 aa		4.59	□□□□□ -1.67
APM3	YBR288C	YPR027C	Q12079	277 aa		4.59	□□□□□ -1.67
APM3	YBR288C	YMR084W	A2P2R3	262 aa		4.58	□□□□□ -1.68
APM3	YBR288C	PCK1	P10963	549 aa		4.58	□□□□□ -1.68
APM3	YBR288C	BEM3	P32873	1128 aa		4.58	□□□□□ -1.68
APM3	YBR288C	GPP2	P40106	250 aa	Known RBP	4.58	□□□□□ -1.68
APM3	YBR288C	PSA1	P41940	361 aa	Known RBP	4.58	□□□□□ -1.68
APM3	YBR288C	PEF1	P53238	335 aa		4.57	□□□□□ -1.68
APM3	YBR288C	WAR1	Q03631	944 aa		4.57	□□□□□ -1.68
APM3	YBR288C	SKY1	Q03656	742 aa		4.57	□□□□□ -1.68
APM3	YBR288C	RMP1	Q12530	201 aa		4.57	□□□□□ -1.68
APM3	YBR288C	YEL076C-A	P0CX16	216 aa		4.56	□□□□□ -1.68
APM3	YBR288C	YLR464W	P0CX17	216 aa		4.56	□□□□□ -1.68
APM3	YBR288C	AEP2	P22136	580 aa		4.56	□□□□□ -1.68
APM3	YBR288C	SRP68	P38687	599 aa	Known RBP	4.56	□□□□□ -1.68
APM3	YBR288C	YEL076C	P39971	216 aa		4.56	□□□□□ -1.68
APM3	YBR288C	PEA2	P40091	420 aa		4.56	□□□□□ -1.68
APM3	YBR288C	DUG1	P43616	481 aa	Known RBP	4.56	□□□□□ -1.68
APM3	YBR288C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
APM3	YBR288C	DSS4	P32601	143 aa		4.56	□□□□□ -1.68
APM3	YBR288C	APD1	P38281	316 aa		4.56	□□□□□ -1.68
APM3	YBR288C	NMD5	P46970	1048 aa		4.56	□□□□□ -1.68
APM3	YBR288C	PCL8	Q08966	492 aa		4.56	□□□□□ -1.68
APM3	YBR288C	PRS5	Q12265	496 aa	Known RBP	4.56	□□□□□ -1.68
APM3	YBR288C	SEC12	P11655	471 aa		4.55	□□□□□ -1.68
APM3	YBR288C	YPK1	P12688	680 aa	Known RBP	4.55	□□□□□ -1.68
APM3	YBR288C	BST1	P43571	1029 aa		4.55	□□□□□ -1.68
APM3	YBR288C	IRC5	P43610	853 aa		4.55	□□□□□ -1.68
APM3	YBR288C	MDR1	P53258	950 aa		4.55	□□□□□ -1.68
APM3	YBR288C	MPS1	P54199	764 aa		4.55	□□□□□ -1.68
APM3	YBR288C	YOR378W	Q08902	515 aa		4.55	□□□□□ -1.68
APM3	YBR288C	BET2	P20133	325 aa		4.54	□□□□□ -1.68
APM3	YBR288C	OPT1	P40897	799 aa		4.54	□□□□□ -1.68
APM3	YBR288C	TDA10	P42938	290 aa		4.54	□□□□□ -1.68
APM3	YBR288C	AAC1	P04710	309 aa		4.53	□□□□□ -1.68
APM3	YBR288C	GSY2	P27472	705 aa		4.53	□□□□□ -1.68
APM3	YBR288C	EUG1	P32474	517 aa		4.53	□□□□□ -1.68
APM3	YBR288C	BPL1	P48445	690 aa	Predicted RBP	4.53	□□□□□ -1.68
APM3	YBR288C	RSC9	Q03124	581 aa		4.53	□□□□□ -1.68
APM3	YBR288C	GEP3	Q08622	556 aa		4.53	□□□□□ -1.68
APM3	YBR288C	RDL1	Q12305	139 aa	Known RBP	4.53	□□□□□ -1.68
APM3	YBR288C	VPS5	Q92331	675 aa		4.53	□□□□□ -1.68
APM3	YBR288C	URE2	P23202	354 aa	Known RBP	4.52	□□□□□ -1.69
APM3	YBR288C	CWH43	P25618	953 aa		4.52	□□□□□ -1.69
APM3	YBR288C	ECM32	P32644	1121 aa	Known RBP	4.52	□□□□□ -1.69
APM3	YBR288C	UBP12	P39538	1254 aa		4.52	□□□□□ -1.69
APM3	YBR288C	EAF5	P39995	279 aa		4.52	□□□□□ -1.69
APM3	YBR288C	SNO3	P43544	222 aa		4.52	□□□□□ -1.69
APM3	YBR288C	NIT2	P47016	307 aa		4.52	□□□□□ -1.69
APM3	YBR288C	ERG13	P54839	491 aa	Known RBP	4.52	□□□□□ -1.69
APM3	YBR288C	BSP1	Q06604	576 aa		4.52	□□□□□ -1.69
APM3	YBR288C	CWC2	Q12046	339 aa	Predicted RBP	4.52	□□□□□ -1.69
APM3	YBR288C	SPC105	P53148	917 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms