RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SEC24BO95487 1268 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 ATP5JP18859 108 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 CAP1Q01518 475 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 SLC9C1Q4G0N8 1177 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 TNNI3KQ59H18 835 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 OGFOD1Q8N543 542 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 TTLL11Q8NHH1 800 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 OTUD7AQ8TE49 926 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-234ENST00000642041 RILPL2Q969X0 211 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 WNK4Q96J92 1243 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 FPGT-TNNI3KV9GXZ4 949 aa20.74■□□□□ 0.91
PHGDH-234ENST00000642041 ANAPC15P60006 121 aa20.73■□□□□ 0.91
PHGDH-234ENST00000642041 LAMB1P07942 1786 aa20.72■□□□□ 0.91
PHGDH-234ENST00000642041 MMP14P50281 582 aa20.72■□□□□ 0.91
PHGDH-234ENST00000642041 ARHGEF6Q15052 776 aa20.72■□□□□ 0.91
PHGDH-234ENST00000642041 MAP3K11Q16584 847 aa20.72■□□□□ 0.91
PHGDH-234ENST00000642041 KIAA1211Q6ZU35 1233 aa20.72■□□□□ 0.91
PHGDH-234ENST00000642041 APOBEC3FQ8IUX4 373 aaKnown RBP20.72■□□□□ 0.91
PHGDH-234ENST00000642041 SNX21Q969T3 373 aa20.72■□□□□ 0.91
PHGDH-234ENST00000642041 EAF2Q96CJ1 260 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-234ENST00000642041 PRO3102Q9H379 93 aa20.72■□□□□ 0.91
PHGDH-234ENST00000642041 RAD50Q92878 1312 aa20.72■□□□□ 0.91
PHGDH-234ENST00000642041 CHMLP26374 656 aa20.71■□□□□ 0.91
PHGDH-234ENST00000642041 SIL1Q9H173 461 aa20.71■□□□□ 0.91
PHGDH-234ENST00000642041 PTCH2Q9Y6C5 1203 aa20.71■□□□□ 0.91
PHGDH-234ENST00000642041 UNCXA6NJT0 531 aa20.7■□□□□ 0.9
PHGDH-234ENST00000642041 RABEP1Q15276 862 aa20.7■□□□□ 0.9
PHGDH-234ENST00000642041 CCDC158Q5M9N0 1113 aa20.7■□□□□ 0.9
PHGDH-234ENST00000642041 DPF3Q92784 378 aa20.7■□□□□ 0.9
PHGDH-234ENST00000642041 ESYT1Q9BSJ8 1104 aa20.7■□□□□ 0.9
PHGDH-234ENST00000642041 USP26Q9BXU7 913 aa20.7■□□□□ 0.9
PHGDH-234ENST00000642041 GREM2Q9H772 168 aa20.7■□□□□ 0.9
PHGDH-234ENST00000642041 MROH5Q6ZUA9 1318 aa20.7■□□□□ 0.9
PHGDH-234ENST00000642041 ITGA6P23229 1130 aa20.69■□□□□ 0.9
PHGDH-234ENST00000642041 DACT2Q5SW24 774 aa20.69■□□□□ 0.9
PHGDH-234ENST00000642041 CLMNQ96JQ2 1002 aa20.69■□□□□ 0.9
PHGDH-234ENST00000642041 CDC5LQ99459 802 aaKnown RBP20.69■□□□□ 0.9
PHGDH-234ENST00000642041 SEC31BQ9NQW1 1179 aa20.69■□□□□ 0.9
PHGDH-234ENST00000642041 DIAPH3Q9NSV4 1193 aa20.69■□□□□ 0.9
PHGDH-234ENST00000642041 FZD1Q9UP38 647 aa20.69■□□□□ 0.9
PHGDH-234ENST00000642041 LAMA3Q16787 3333 aa20.69■□□□□ 0.9
PHGDH-234ENST00000642041 TFCP2Q12800 502 aa20.68■□□□□ 0.9
PHGDH-234ENST00000642041 LDHAL6AQ6ZMR3 332 aa20.68■□□□□ 0.9
PHGDH-234ENST00000642041 MYO3BQ8WXR4 1341 aa20.68■□□□□ 0.9
PHGDH-234ENST00000642041 TESPA1A2RU30 521 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-234ENST00000642041 PPP1R12BO60237 982 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-234ENST00000642041 ATP2B4P23634 1241 aa20.67■□□□□ 0.9
PHGDH-234ENST00000642041 MCM2P49736 904 aa20.67■□□□□ 0.9
PHGDH-234ENST00000642041 ATG9AQ7Z3C6 839 aa20.67■□□□□ 0.9
PHGDH-234ENST00000642041 HSCBQ8IWL3 235 aa20.67■□□□□ 0.9
PHGDH-234ENST00000642041 CCDC85AQ96PX6 553 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-234ENST00000642041 PTPN18Q99952 460 aa20.67■□□□□ 0.9
PHGDH-234ENST00000642041 MXD3Q9BW11 206 aa20.67■□□□□ 0.9
PHGDH-234ENST00000642041 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
PHGDH-234ENST00000642041 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-234ENST00000642041 XDHP47989 1333 aa20.67■□□□□ 0.9
PHGDH-234ENST00000642041 AK9Q5TCS8 1911 aa20.66■□□□□ 0.9
PHGDH-234ENST00000642041 WTIPA6NIX2 430 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-234ENST00000642041 IGHMBP2P38935 993 aaKnown RBP20.66■□□□□ 0.9
PHGDH-234ENST00000642041 ZNF512BQ96KM6 892 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-234ENST00000642041 COL1A1P02452 1464 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-234ENST00000642041 MYCP01106 439 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-234ENST00000642041 STRIP1Q5VSL9 837 aa20.65■□□□□ 0.9
PHGDH-234ENST00000642041 IL17RAQ96F46 866 aa20.65■□□□□ 0.9
PHGDH-234ENST00000642041 ZBED3Q96IU2 234 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-234ENST00000642041 CCDC8Q9H0W5 538 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-234ENST00000642041 DEFB129Q9H1M3 183 aa20.65■□□□□ 0.9
PHGDH-234ENST00000642041 CNNM1Q9NRU3 951 aa20.65■□□□□ 0.9
PHGDH-234ENST00000642041 A0A1W2PPC1 479 aa20.64■□□□□ 0.89
PHGDH-234ENST00000642041 ST18O60284 1047 aa20.64■□□□□ 0.89
PHGDH-234ENST00000642041 GJA5P36382 358 aa20.64■□□□□ 0.89
PHGDH-234ENST00000642041 KLHDC4Q8TBB5 520 aa20.64■□□□□ 0.89
PHGDH-234ENST00000642041 MPHOSPH8Q99549 860 aa20.64■□□□□ 0.89
PHGDH-234ENST00000642041 HAUS7Q99871 368 aa20.64■□□□□ 0.89
PHGDH-234ENST00000642041 SPEF2Q9C093 1822 aa20.63■□□□□ 0.89
PHGDH-234ENST00000642041 IGSF3O75054 1194 aa20.63■□□□□ 0.89
PHGDH-234ENST00000642041 GORABQ5T7V8 394 aa20.63■□□□□ 0.89
PHGDH-234ENST00000642041 ANKRD18AQ8IVF6 992 aa20.63■□□□□ 0.89
PHGDH-234ENST00000642041 RIPOR2Q9Y4F9 1068 aa20.63■□□□□ 0.89
PHGDH-234ENST00000642041 SGSM2O43147 1006 aa20.62■□□□□ 0.89
PHGDH-234ENST00000642041 UQCRFS1P1P0C7P4 283 aa20.62■□□□□ 0.89
PHGDH-234ENST00000642041 METTL24Q5JXM2 366 aa20.62■□□□□ 0.89
PHGDH-234ENST00000642041 SH3TC2Q8TF17 1288 aa20.62■□□□□ 0.89
PHGDH-234ENST00000642041 ZNF594Q96JF6 807 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-234ENST00000642041 NEUROD6Q96NK8 337 aa20.62■□□□□ 0.89
PHGDH-234ENST00000642041 SNRKQ9NRH2 765 aa20.62■□□□□ 0.89
PHGDH-234ENST00000642041 DBNLQ9UJU6 430 aaKnown RBP20.62■□□□□ 0.89
PHGDH-234ENST00000642041 ZNF646O15015 1829 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-234ENST00000642041 MED23Q9ULK4 1368 aa20.61■□□□□ 0.89
PHGDH-234ENST00000642041 SSC5DA1L4H1 1573 aa20.61■□□□□ 0.89
PHGDH-234ENST00000642041 A0A1B0GUL7 405 aa20.61■□□□□ 0.89
PHGDH-234ENST00000642041 ZFYP08048 801 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-234ENST00000642041 TTF1Q15361 905 aaPredicted RBP20.61■□□□□ 0.89
PHGDH-234ENST00000642041 FBXW7Q969H0 707 aa20.61■□□□□ 0.89
PHGDH-234ENST00000642041 SHISA4Q96DD7 197 aa20.61■□□□□ 0.89
PHGDH-234ENST00000642041 HTATIP2Q9BUP3 242 aa20.61■□□□□ 0.89
PHGDH-234ENST00000642041 PPP2R3BQ9Y5P8 575 aa20.61■□□□□ 0.89
PHGDH-234ENST00000642041 NR2E3Q9Y5X4 410 aa20.61■□□□□ 0.89
PHGDH-234ENST00000642041 SOX1O00570 391 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-234ENST00000642041 PDE8BO95263 885 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms