RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TMOD2Q9NZR1 351 aa14.13□□□□□ -0.15
PTP4A1-207ENST00000639568 PRUNE2Q8WUY3 3088 aa14.13□□□□□ -0.15
PTP4A1-207ENST00000639568 OTOFQ9HC10 1997 aa14.13□□□□□ -0.15
PTP4A1-207ENST00000639568 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
PTP4A1-207ENST00000639568 COA7Q96BR5 231 aa14.12□□□□□ -0.15
PTP4A1-207ENST00000639568 ZNF341Q9BYN7 854 aa14.12□□□□□ -0.15
PTP4A1-207ENST00000639568 MAP3K2Q9Y2U5 619 aa14.12□□□□□ -0.15
PTP4A1-207ENST00000639568 CACNB3P54284 484 aa14.11□□□□□ -0.15
PTP4A1-207ENST00000639568 UBE3BQ7Z3V4 1068 aa14.11□□□□□ -0.15
PTP4A1-207ENST00000639568 LBHD1Q9BQE6 289 aaPredicted RBP14.11□□□□□ -0.15
PTP4A1-207ENST00000639568 HMX1Q9NP08 348 aaPredicted RBP14.11□□□□□ -0.15
PTP4A1-207ENST00000639568 KCNH4Q9UQ05 1017 aa14.11□□□□□ -0.15
PTP4A1-207ENST00000639568 TMEM265A0A087WTH1 108 aa14.1□□□□□ -0.15
PTP4A1-207ENST00000639568 MIGA2Q7L4E1 593 aa14.1□□□□□ -0.15
PTP4A1-207ENST00000639568 SMCR8Q8TEV9 937 aaPredicted RBP14.1□□□□□ -0.15
PTP4A1-207ENST00000639568 MUC3AQ02505 3323 aa14.09□□□□□ -0.15
PTP4A1-207ENST00000639568 ANKRD18BA2A2Z9 1011 aa14.09□□□□□ -0.15
PTP4A1-207ENST00000639568 HMGCRP04035 888 aa14.09□□□□□ -0.15
PTP4A1-207ENST00000639568 IGKV5-2P06315 115 aa14.09□□□□□ -0.15
PTP4A1-207ENST00000639568 INPP5BP32019 993 aa14.09□□□□□ -0.15
PTP4A1-207ENST00000639568 TJAP1Q5JTD0 557 aa14.09□□□□□ -0.15
PTP4A1-207ENST00000639568 FASTKD5Q7L8L6 764 aaKnown RBP14.09□□□□□ -0.15
PTP4A1-207ENST00000639568 FAM83AQ86UY5 434 aa14.09□□□□□ -0.15
PTP4A1-207ENST00000639568 ECM29Q5VYK3 1845 aa14.08□□□□□ -0.15
PTP4A1-207ENST00000639568 ELL2O00472 640 aaPredicted RBP14.08□□□□□ -0.16
PTP4A1-207ENST00000639568 CXCL11O14625 94 aa14.08□□□□□ -0.16
PTP4A1-207ENST00000639568 FOSL2P15408 326 aa14.08□□□□□ -0.16
PTP4A1-207ENST00000639568 MOGSQ13724 837 aa14.08□□□□□ -0.16
PTP4A1-207ENST00000639568 GPAT2Q6NUI2 795 aa14.08□□□□□ -0.16
PTP4A1-207ENST00000639568 CHMP4AQ9BY43 222 aa14.08□□□□□ -0.16
PTP4A1-207ENST00000639568 SEMA6BQ9H3T3 888 aa14.08□□□□□ -0.16
PTP4A1-207ENST00000639568 PI4KAP2A4QPH2 592 aa14.07□□□□□ -0.16
PTP4A1-207ENST00000639568 H7C1W4 665 aa14.07□□□□□ -0.16
PTP4A1-207ENST00000639568 PLIN1O60240 522 aa14.07□□□□□ -0.16
PTP4A1-207ENST00000639568 CWF19L2Q2TBE0 894 aaKnown RBP14.07□□□□□ -0.16
PTP4A1-207ENST00000639568 KSR2Q6VAB6 950 aa14.07□□□□□ -0.16
PTP4A1-207ENST00000639568 PI4KAP1Q8N8J0 262 aa14.07□□□□□ -0.16
PTP4A1-207ENST00000639568 MYLIPQ8WY64 445 aa14.07□□□□□ -0.16
PTP4A1-207ENST00000639568 TEKT1Q969V4 418 aa14.07□□□□□ -0.16
PTP4A1-207ENST00000639568 HDLBPQ00341 1268 aaKnown RBP14.06□□□□□ -0.16
PTP4A1-207ENST00000639568 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
PTP4A1-207ENST00000639568 FKBP1CQ5VVH2 108 aa14.06□□□□□ -0.16
PTP4A1-207ENST00000639568 TDRD7Q8NHU6 1098 aaKnown RBP14.06□□□□□ -0.16
PTP4A1-207ENST00000639568 OGDHLQ9ULD0 1010 aa14.06□□□□□ -0.16
PTP4A1-207ENST00000639568 NEURL1BA8MQ27 555 aa14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 CSF1RP07333 972 aa14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 HIBADHP31937 336 aaKnown RBP14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 IFIT5Q13325 482 aaKnown RBP14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 CCDC30Q5VVM6 783 aa14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 GADL1Q6ZQY3 521 aa14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 PLA2G12BQ9BX93 195 aa14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
PTP4A1-207ENST00000639568 ZBTB22O15209 634 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 MAP3K12Q12852 859 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 ANKRD13CQ8N6S4 541 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 ZNF112Q9UJU3 913 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 SLC45A1Q9Y2W3 748 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 CHMP3Q9Y3E7 222 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 PFASO15067 1338 aa14.04□□□□□ -0.16
PTP4A1-207ENST00000639568 FRAT2O75474 233 aaPredicted RBP14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 GYG1P46976 350 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 LRRC26Q2I0M4 334 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 TAF7LQ5H9L4 462 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 NOL9Q5SY16 702 aaKnown RBP14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 VPS37DQ86XT2 251 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 CCDC146Q8IYE0 955 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 ZDHHC15Q96MV8 337 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 PICK1Q9NRD5 415 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 ZHX2Q9Y6X8 837 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 SPEF2Q9C093 1822 aa14.03□□□□□ -0.16
PTP4A1-207ENST00000639568 A0A0G2JLL6 359 aaPredicted RBP14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 TRIM32Q13049 653 aa14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 GCKRQ14397 625 aa14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 LDHAL6AQ6ZMR3 332 aa14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 PRRT2Q7Z6L0 340 aaPredicted RBP14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 TBC1D22AQ8WUA7 517 aa14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 MYH16Q9H6N6 1097 aa14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 CNNM1Q9NRU3 951 aa14.02□□□□□ -0.17
PTP4A1-207ENST00000639568 COL2A1P02458 1487 aaPredicted RBP14.01□□□□□ -0.17
PTP4A1-207ENST00000639568 RPAP1Q9BWH6 1393 aaPredicted RBP14.01□□□□□ -0.17
PTP4A1-207ENST00000639568 COL6A1P12109 1028 aa14.01□□□□□ -0.17
PTP4A1-207ENST00000639568 FAM151AQ8WW52 585 aa14.01□□□□□ -0.17
PTP4A1-207ENST00000639568 ALPK3Q96L96 1907 aa14.01□□□□□ -0.17
PTP4A1-207ENST00000639568 TCP10Q12799 353 aa14□□□□□ -0.17
PTP4A1-207ENST00000639568 GRIK5Q16478 980 aa14□□□□□ -0.17
PTP4A1-207ENST00000639568 FAM110CQ1W6H9 321 aa14□□□□□ -0.17
PTP4A1-207ENST00000639568 APOBEC3HQ6NTF7 200 aaKnown RBP14□□□□□ -0.17
PTP4A1-207ENST00000639568 FAM84BQ96KN1 310 aaPredicted RBP14□□□□□ -0.17
PTP4A1-207ENST00000639568 MRIQ9BWK5 157 aa14□□□□□ -0.17
PTP4A1-207ENST00000639568 PNMA3Q9UL41 463 aa14□□□□□ -0.17
PTP4A1-207ENST00000639568 ARAP2Q8WZ64 1704 aa14□□□□□ -0.17
PTP4A1-207ENST00000639568 MAST3O60307 1309 aa13.99□□□□□ -0.17
PTP4A1-207ENST00000639568 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
PTP4A1-207ENST00000639568 SMAD3P84022 425 aaKnown RBP13.99□□□□□ -0.17
PTP4A1-207ENST00000639568 UBE4AQ14139 1066 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms